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Related papers: Parameter estimation of epidemic spread in two-lay…

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In this paper, we study the spread of a classical SIR process on a two-layer random network, where the first layer represents the households, while the second layer models the contacts outside the households by a random scale-free graph. We…

Populations and Evolution · Quantitative Biology 2024-03-01 Ágnes Backhausz , Edit Bognár , Villő Csiszár , Damján Tárkányi , András Zempléni

When an epidemic spreads into a population, it is often unpractical or impossible to have a continuous monitoring of all subjects involved. As an alternative, algorithmic solutions can be used to infer the state of the whole population from…

Populations and Evolution · Quantitative Biology 2021-05-12 Abhishek Tomy , Matteo Razzanelli , Francesco Di Lauro , Daniela Rus , Cosimo Della Santina

We study the problem of estimating the parameters (i.e., infection rate and recovery rate) governing the spread of epidemics in networks. Such parameters are typically estimated by measuring various characteristics (such as the number of…

Systems and Control · Electrical Eng. & Systems 2021-05-12 Lintao Ye , Philip E. Paré , Shreyas Sundaram

In this paper, we propose a realistic mathematical model taking into account the mutual interference among the interacting populations. This model attempts to describe the control (vaccination) function as a function of the number of…

Neural and Evolutionary Computing · Computer Science 2016-11-18 V. Sree Hari Rao , M. Naresh Kumar

Our main goal is to examine the role of communities in epidemic spread in a random graph model. More precisely, we consider a random graph model which consists of overlapping complete graphs, representing households, workplaces, school…

Physics and Society · Physics 2023-08-25 Ágnes Backhausz , György J. Székely

We study the problem of parameter estimation based on infection data from an epidemic outbreak on a graph. We assume that successive infections occur via contagion; i.e., transmissions can only spread across existing directed edges in the…

Statistics Theory · Mathematics 2018-06-15 Justin Khim , Po-Ling Loh

Epidemic forecasting is the key to effective control of epidemic transmission and helps the world mitigate the crisis that threatens public health. To better understand the transmission and evolution of epidemics, we propose EpiGNN, a graph…

Quantitative Methods · Quantitative Biology 2022-08-25 Feng Xie , Zhong Zhang , Liang Li , Bin Zhou , Yusong Tan

Since the onset of the COVID-19 pandemic, there has been a growing interest in studying epidemiological models. Traditional mechanistic models mathematically describe the transmission mechanisms of infectious diseases. However, they often…

Machine Learning · Computer Science 2024-09-10 Zewen Liu , Guancheng Wan , B. Aditya Prakash , Max S. Y. Lau , Wei Jin

The spread of viruses in biological networks, computer networks, and human contact networks can have devastating effects; developing and analyzing mathematical models of these systems can be insightful and lead to societal benefits. Prior…

Optimization and Control · Mathematics 2016-09-19 Philip E. Paré , Angelia Nedić , Carolyn L. Beck

Accurate prediction of contagious disease outbreaks is vital for informed decision-making. Our study addresses the gap between machine learning algorithms and their epidemiological applications, noting that methods optimal for benchmark…

Machine Learning · Computer Science 2025-06-16 Suhan Guo , Zhenghao Xu , Furao Shen , Jian Zhao

This study presents a neural network-enhanced approach to modeling disease spread dynamics over time and space. Neural networks are used to estimate time-varying parameters, with two calibration methods explored: Approximate Bayesian…

Quantitative Methods · Quantitative Biology 2024-10-29 Randy L. Caga-anan

Throughout the course of an epidemic, the rate at which disease spreads varies with behavioral changes, the emergence of new disease variants, and the introduction of mitigation policies. Estimating such changes in transmission rates can…

Methodology · Statistics 2022-11-29 Jenny Huang , Raphaël Morsomme , David Dunson , Jason Xu

Modeling epidemic spread is critical for informing policy decisions aimed at mitigation. Accordingly, in this work we present a new data-driven method based on Gaussian process regression (GPR) to model epidemic spread through the…

Machine Learning · Statistics 2025-06-23 Baike She , Lei Xin , Philip E. Paré , Matthew Hale

A standard model for epidemics is the SIR model on a graph. We introduce a simple algorithm that uses the early infection times from a sample path of the SIR model to estimate the parameters this model, and we provide a performance…

Information Theory · Computer Science 2020-08-11 Charles Clum , Dustin G. Mixon

Spreading processes have been largely studied in the literature, both analytically and by means of large-scale numerical simulations. These processes mainly include the propagation of diseases, rumors and information on top of a given…

Physics and Society · Physics 2019-05-10 Guilherme Ferraz de Arruda , Francisco A. Rodrigues , Yamir Moreno

A problem closely related to epidemiology, where a subgraph of 'infected' links is defined inside a larger network, is investigated. This subgraph is generated from the underlying network by a random variable, which decides whether a link…

Physics and Society · Physics 2016-04-07 M Cotacallapa , M O Hase

The use of network theory to model disease propagation on populations introduces important elements of reality to the classical epidemiological models. The use of random geometric graphs (RGG) is one of such network models that allows for…

Physics and Society · Physics 2016-12-21 Ernesto Estrada , Sandro Meloni , Matthew Sheerin , Yamir Moreno

A random graph model with prescribed degree distribution and degree dependent edge weights is introduced. Each vertex is independently equipped with a random number of half-edges and each half-edge is assigned an integer valued weight…

Probability · Mathematics 2015-05-28 Tom Britton , Maria Deijfen , Fredrik Liljeros

Modeling the spread of infections on networks is a well-studied and important field of research. Most infection and diffusion models require a real value or probability on the edges of the network as an input, but this is rarely available…

Social and Information Networks · Computer Science 2017-06-26 Andras Bota , Lauren Gardner

We discuss various models for epidemics on networks that rely on Markov chains. Random walks on graphs are often used to predict epidemic spread and to investigate possible control actions to mitigate them. In this study, we demonstrate…

Physics and Society · Physics 2022-07-07 Sooyeong Kim , Jane Breen , Ekaterina Dudkina , Federico Poloni , Emanuele Crisostomi
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