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Related papers: Microstructure.jl: a Julia Package for Probabilist…

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Diffusion-weighted MRI is the forerunner of the rapidly developed microstructural MRI aimed at in vivo evaluation of the cellular tissue architecture. This brief review focuses on the spatiotemporal scales of the microstructure that are…

Medical Physics · Physics 2020-08-14 Valerij G. Kiselev

InvertibleNetworks.jl is a Julia package designed for the scalable implementation of normalizing flows, a method for density estimation and sampling in high-dimensional distributions. This package excels in memory efficiency by leveraging…

Machine Learning · Computer Science 2023-12-22 Rafael Orozco , Philipp Witte , Mathias Louboutin , Ali Siahkoohi , Gabrio Rizzuti , Bas Peters , Felix J. Herrmann

Accurate quantification of local packing density and mixing in simulations of particulate systems is essential for many industrial applications. Traditional methods which simply count the number of particle centres within a given volume of…

Soft Condensed Matter · Physics 2025-09-22 Freddie J. Barter , Christopher R. K. Windows-Yule

Random variables and their distributions are a central part in many areas of statistical methods. The Distributions.jl package provides Julia users and developers tools for working with probability distributions, leveraging Julia features…

Microstructure reconstruction has been an essential part of computational material engineering to reveal the relationship between microstructures and material properties. However, finding a general solution for microstructure…

Materials Science · Physics 2023-01-24 Kang-Hyun Lee , Gun Jin Yun

MicroMagnetic.jl is an open-source Julia package for micromagnetic and atomistic simulations. Using the features of the Julia programming language, MicroMagnetic.jl supports CPU and various GPU platforms, including NVIDIA, AMD, Intel, and…

Mesoscale and Nanoscale Physics · Physics 2024-09-09 Weiwei Wang , Boyao Lyu , Lingyao Kong , Hans Fangohr , Haifeng Du

StateSpaceModels.jl is an open-source Julia package for modeling, forecasting and simulating time series in a state-space framework. The package represents a straightforward tool that can be useful for a wide range of applications that deal…

Computation · Statistics 2020-02-11 Raphael Saavedra , Guilherme Bodin , Mario Souto

In this paper, we present Insertus.jl, the Julia package that can help the user generate a randomization sequence of a given length for a multi-arm trial with a pre-specified target allocation ratio and assess the operating characteristics…

Methodology · Statistics 2024-07-22 Yevgen Ryeznik , Oleksandr Sverdlov

Mathematical models of natural and man-made systems often have many adjustable parameters that must be estimated from multiple, potentially conflicting datasets. Rather than reporting a single best-fit parameter vector, it is often more…

Quantitative Methods · Quantitative Biology 2026-04-01 Jeffrey D. Varner

Probabilistic programming and statistical computing are vibrant areas in the development of the Julia programming language, but the underlying infrastructure dramatically predates recent developments. The goal of MeasureTheory.jl is to…

Computation · Statistics 2022-07-05 Chad Scherrer , Moritz Schauer

Scorio.jl is a Julia package for evaluating and ranking systems from repeated responses to shared tasks. It provides a common tensor-based interface for direct score-based, pairwise, psychometric, voting, graph, and listwise methods, so the…

Mathematical Software · Computer Science 2026-03-17 Mohsen Hariri , Michael Hinczewski , Vipin Chaudhary

Diffusion magnetic resonance imaging (dMRI) is a crucial non-invasive technique for exploring the microstructure of the living human brain. Traditional hand-crafted and model-based tissue microstructure reconstruction methods often require…

Image and Video Processing · Electrical Eng. & Systems 2025-02-26 Xinrui Ma , Jian Cheng , Wenxin Fan , Ruoyou Wu , Yongquan Ye , Shanshan Wang

Machine learning is a powerful approach for fitting microstructural models to diffusion MRI data. Early machine learning microstructure imaging implementations trained regressors to estimate model parameters in a supervised way, using…

Image and Video Processing · Electrical Eng. & Systems 2022-10-06 Jason P. Lim , Stefano B. Blumberg , Neil Narayan , Sean C. Epstein , Daniel C. Alexander , Marco Palombo , Paddy J. Slator

PowerDynamics.jl is a Julia package for time-domain modeling of power grids that is specifically designed for the stability analysis of systems with high shares of renewable energies. It makes use of Julia's state-of-the-art differential…

Systems and Control · Electrical Eng. & Systems 2021-12-15 Anton Plietzsch , Raphael Kogler , Sabine Auer , Julia Merino , Asier Gil-de-Muro , Jan Liße , Christina Vogel , Frank Hellmann

We present BSTModelKit.jl, an open-source Julia package for constructing, solving, and analyzing Biochemical Systems Theory (BST) models of biochemical networks. The package implements S-system representations, a canonical power-law…

Molecular Networks · Quantitative Biology 2026-03-20 Sandra Vadhin , Jeffrey D. Varner

Structural identifiability is the theoretical ability to uniquely recover model parameters from ideal, noise-free data and is a prerequisite for reliable parameter estimation in epidemic modeling. Despite its importance for calibration and…

Quantitative Methods · Quantitative Biology 2026-04-15 Yuganthi R. Liyanage , Omar Saucedo , Necibe Tuncer , Gerardo Chowell

The demand for high-performance computing (HPC) is ever-increasing for everyday statistical computing purposes. The downside is that we need to write specialized code for each HPC environment. CPU-level parallelization needs to be…

Computation · Statistics 2020-11-02 Seyoon Ko , Hua Zhou , Jin Zhou , Joong-Ho Won

MultiPrecisionArrays.jl is a Julia package. This package provides data structures and solvers for several variants of iterative refinement. It will become much more useful when half precision (aka Float16) is fully supported in LAPACK/BLAS.…

Numerical Analysis · Mathematics 2025-08-11 C. T. Kelley

Purpose: The aim of this work is to develop a high-performance, flexible and easy-to-use MRI reconstruction framework using the scientific programming language Julia. Methods: Julia is a modern, general purpose programming language with…

Medical Physics · Physics 2021-03-22 Tobias Knopp , Mirco Grosser

We introduce $\texttt{RandomMeas$.$jl}$, a modular and high-performance open-source software package written in Julia for implementing and analyzing randomized measurement protocols in quantum computing. Randomized measurements provide a…

Quantum Physics · Physics 2026-04-29 Andreas Elben , Benoît Vermersch
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