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Assembly theory predicts that a distinguishing signature of life is its ability to produce complex molecules in abundance, opening new possibilities for life detection. Experimental validation of this approach has so far relied on abiotic…

Biological Physics · Physics 2025-09-08 Alexandre Champagne-Ruel , Christopher P. Kempes , Cole Mathis

Seeds of sunflowers are often modelled by the map $n\longmapsto \varphi_\theta(n)=\sqrt{n}e^{2i\pi n\theta}$ leading to a roughly uniform repartition with two consecutive seeds separated by the divergence angle $2\pi\theta$ for $\theta$ the…

Number Theory · Mathematics 2013-05-13 Roland Bacher

Relative frequencies of mechanically stable (MS) packings of frictionless bidisperse disks are studied numerically in small systems. The packings are created by successively compressing or decompressing a system of soft purely repulsive…

Statistical Mechanics · Physics 2009-11-11 Guo-Jie Gao , Jerzy Blawzdziewicz , Corey S. O'Hern

In crystalline systems, higher-order topology, characterized by topological states of codimension greater than one, typically arises from the mismatch between Wannier centers and atomic sites, leading to filling anomalies. However, this…

Superconductivity · Physics 2024-01-29 Chaozhi Ouyang , Qinghua He , Dong-Hui Xu , Feng Liu

Seed banks are a common characteristics to many plant species, which allow storage of genetic diversity in the soil as dormant seeds for various periods of time. We investigate an above-ground population following a Fisher-Wright model with…

Populations and Evolution · Quantitative Biology 2017-01-13 Bendix Koopmann , Johannes Müller , Aurélien Tellier , Daniel Živković

We use numerical simulation to investigate and analyze the way that rigid disks and spheres arrange themselves when compressed next to incommensurate substrates. For disks, a movable set is pressed into a jammed state against an ordered…

Materials Science · Physics 2009-11-10 Boris D. Lubachevsky , Frank H. Stillinger

The sunflower equation describes the motion of the tip of a plant due to the auxin transportation under the influence of gravity. This work proposes the fractional-order generalization to this delay differential equation. The equation…

Dynamical Systems · Mathematics 2024-07-04 Deepa Gupta , Sachin Bhalekar

Many species of plants are found in regions to which they are alien and their global distribution has been found to exhibit several remarkable patterns,characterised by exponential functions of the kind that could arise through versions of…

Populations and Evolution · Quantitative Biology 2017-12-12 Michael G Bowler , Colleen K Kelly

The dynamical evolution of dislocations in plastically deformed metals is controlled by both deterministic factors arising out of applied loads and stochastic effects appearing due to fluctuations of internal stress. Such type of stochastic…

Statistical Mechanics · Physics 2016-09-21 Amit K. Chattopadhyay , Elias C. Aifantis

The discrete modeling of a large class of mechanical structures can be based on a stick-and-spring concept. We here present a stick-and-spring theory with potential application to the statics and the dynamics of such nanostructures as…

Materials Science · Physics 2013-07-16 Antonino Favata , Andrea Micheletti , Paolo Podio-Guidugli

We prove that the statistical properties of random perturbations of a nonuniformly hyperbolic diffeomorphism are described by a finite number of stationary measures. We also give necessary and sufficient conditions for the stochastic…

Dynamical Systems · Mathematics 2011-11-10 Jose F. Alves , Vitor Araujo , Carlos H. Vasquez

A model of the regular arrangement of leaves on a plant stem (phyllotactic patterns) is proposed, based on a new plant pattern algorithm. Tripartite patterning is proposed to occur by the interaction of two signaling pathways. Each pathway…

Tissues and Organs · Quantitative Biology 2009-07-29 F. W. Cummings

Co-limitation of marine phytoplankton growth by light and nutrient, both of which are essential for phytoplankton, leads to complex dynamic behavior and a wide array of coherent patterns. The building blocks of this array can be considered…

Pattern Formation and Solitons · Physics 2015-05-20 Antonios Zagaris , Arjen Doelman

Chloroplasts regulate their growth to optimize photosynthesis. Quantitative data shows that the ratio of total chloroplast area to mesophyll cell area is constant across different cells within a single species, and also across species.…

Subcellular Processes · Quantitative Biology 2015-09-03 Kelly M. Paton , Lisa Anderson , Pauline Flottat , Eric N. Cytrynbaum

Many physical systems can be mapped onto solved or "solvable" models of magnetism. In this work, we have mapped the statistical mechanics of columnar phases of ideally helical rigid DNA -- subject to the earlier found unusual, frustrated…

Biological Physics · Physics 2009-11-10 A. Wynveen , D. J. Lee , A. A. Kornyshev

The primary factors controlling defect stability in phase-field crystal (PFC) models are examined, with illustrative examples involving several existing variations of the model. Guidelines are presented for constructing models with stable…

Materials Science · Physics 2015-06-11 Joel Berry , Nikolas Provatas , Jörg Rottler , Chad W. Sinclair

Computer simulations give precious insight into the microscopic behavior of supercooled liquids and glasses, but their typical time scales are orders of magnitude shorter than the experimentally relevant ones. We recently closed this gap…

Statistical Mechanics · Physics 2018-03-16 Daniele Coslovich , Misaki Ozawa , Ludovic Berthier

Shape is one of the important characteristics for the structures observed in living organisms. Whereas biologists have proposed models where the shape is controlled on a molecular level [1], physicists, following Turing [2] and d'Arcy…

Tissues and Organs · Quantitative Biology 2010-10-11 Etienne Couturier , Sylvain Courrech du Pont , Stephane Douady

The tight-binding model for a chain, where the hopping constants follow a Fibonacci sequence, predicts multifractality in the spectrum and wavefunctions. Experimentally, we realize this model by chains of small dielectric resonators with…

Disordered Systems and Neural Networks · Physics 2023-08-28 Mattis Reisner , Yanel Tahmi , Frédéric Piéchon , Ulrich Kuhl , Fabrice Mortessagne

Disc non-axisymmetrc components, such as spirals and central bars, are nowadays known to play an important role in shaping galactic discs. Here we use Tree-SPH N-body simulations to examine the effect of these perturbers on two aspects: the…

Astrophysics of Galaxies · Physics 2015-06-03 Ivan Minchev , Benoit Famaey , Alice C. Quillen , Walter Dehnen