Related papers: Counting Permutation Patterns with Multidimensiona…

We enumerate permutations that avoid all but one of the $k$ patterns of length $k$ starting with a monotone increasing subsequence of length $k-1$. We compare the size of such permutation classes to the size of the class of permutations…

Let k be a local field and let A be the two-by-two matrix algebra over k. In our previous work we developed a theory that allows the computation of the set of maximal orders in A containing a given suborder. This set is given as a sub-tree…

We develop algorithms, implemented in Maple, that study the number of vertices with a particular number of children in a random ordered tree where all vertices must have a number of children in some finite set. By calculating the mixed…

We apply a tree-based methodology to solve new, very broadly defined families of nested recursions of the general form R(n)=sum_{i=1}^k R(n-a_i-sum_{j=1}^p R(n-b_{ij})), where a_i are integers, b_{ij} are natural numbers, and k,p are…

Many applications, including rank aggregation and crowd-labeling, can be modeled in terms of a bivariate isotonic matrix with unknown permutations acting on its rows and columns. We consider the problem of estimating such a matrix based on…

We consider the problem of augmenting an $n$-vertex tree with one shortcut in order to minimize the diameter of the resulting graph. The tree is embedded in an unknown space and we have access to an oracle that, when queried on a pair of…

In this paper, we propose a general framework that extends the theory of permutation patterns to higher dimensions and unifies several combinatorial objects studied in the literature. Our approach involves introducing the concept of a…

A \emph{trace} of a sequence is generated by deleting each bit of the sequence independently with a fixed probability. The well-studied \emph{trace reconstruction} problem asks how many traces are required to reconstruct an unknown binary…

In the last decade a huge amount of articles has been published studying pattern avoidance on permutations. From the point of view of enumeration, typically one tries to count permutations avoiding certain patterns according to their…

The last decade brought a significant increase in the amount of data and a variety of new inference methods for reconstructing the detailed evolutionary history of various cancers. This brings the need of designing efficient procedures for…

The interval count problem, a classical question in the study of interval orders, was introduced by Ronald Graham in the 1980s. This problem asks: given an interval order $P$, what is the minimum number of distinct interval lengths required…

In this paper we consider the problem of encoding data into \textit{repeat-free} sequences in which sequences are imposed to contain any $k$-tuple at most once (for predefined $k$). First, the capacity of the repeat-free constraint are…

A chief problem in phylogenetics and database theory is the computation of a maximum consistent tree from a set of rooted or unrooted trees. A standard input are triplets, rooted binary trees on three leaves, or quartets, unrooted binary…

Consider a sequence X_1, X_2,... of i.i.d. uniform random variables taking values in the alphabet set {1,2,...,d}. A k-superpattern is a realization of X_1,...,X_t that contains, as an embedded subsequence, each of the non-order-isomorphic…

Understanding the metric structure of permutation families is fundamental to combinatorics and has applications in social choice theory, bioinformatics, and coding theory. We study permutation families defined by restriction…

We give the first linear-time counting algorithm for processes in anonymous 1-interval-connected dynamic networks with a leader. As a byproduct, we are able to compute in $3n$ rounds every function that is deterministically computable in…

Given two permutations $\sigma$ and $\pi$, the \textsc{Permutation Pattern} problem asks if $\sigma$ is a subpattern of $\pi$. We show that the problem can be solved in time $2^{O(\ell^2\log \ell)}\cdot n$, where $\ell=|\sigma|$ and…

Let $S_{n}$ denote the set of permutations of $[n]=\{1,2,\dots, n\}$. For each integer $k\geq 1$, let $S_{n,k}$ be the set of all permutations of $[n]$ with exactly $k$ disjoint cycles. A subset $H\subseteq S_{n,k}$ is to be a matching if…

We introduce a random graph model based on k-trees, which can be generated by applying a probabilistic preferential attachment rule, but which also has a simple combinatorial description. We carry out a precise distributional analysis of…

In the set of all patterns in $S_n$, it is clear that each k-pattern occurs equally often. If we instead restrict to the class of permutations avoiding a specific pattern, the situation quickly becomes more interesting. Mikl\'os B\'ona…