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Binary jumbled pattern matching asks to preprocess a binary string $S$ in order to answer queries $(i,j)$ which ask for a substring of $S$ that is of length $i$ and has exactly $j$ 1-bits. This problem naturally generalizes to…

Data Structures and Algorithms · Computer Science 2014-07-01 Travis Gagie , Danny Hermelin , Gad M. Landau , Oren Weimann

The k-Tree algorithm [Wagner 02] is a non-trivial algorithm for the average-case k-SUM problem that has found widespread use in cryptanalysis. Its input consists of k lists, each containing n integers from a range of size m. Wagner's…

Cryptography and Security · Computer Science 2024-10-14 Haoxing Lin , Prashant Nalini Vasudevan

Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on…

Combinatorics · Mathematics 2017-02-08 Song Guo , Victor J. W. Guo

Corner trees, introduced in "Even-Zohar and Leng, 2021, Proceedings of the 2021 ACM-SIAM Symposium on Discrete Algorithms", allow for the efficient counting of certain permutation patterns. Here we identify corner trees as a subset of…

Combinatorics · Mathematics 2025-05-12 Joscha Diehl , Emanuele Verri

Generalizing stack sorting and $c$-sorting for permutations, we define the permutree sorting algorithm. Given two disjoint subsets $U$ and $D$ of $\{2, \dots, n-1\}$, the $(U,D)$-permutree sorting tries to sort the permutation $\pi \in…

Combinatorics · Mathematics 2023-07-13 Vincent Pilaud , Viviane Pons , Daniel Tamayo Jiménez

The set of all permutations with $n$ symbols is a symmetric group denoted by $S_n$. A transposition tree, $T$, is a spanning tree over its $n$ vertices $V_T=${$1, 2, 3, \ldots n$} where the vertices are the positions of a permutation $\pi$…

Data Structures and Algorithms · Computer Science 2018-11-20 Bhadrachalam Chitturi , Indulekha T S

In the \emph{$k$-Diameter-Optimally Augmenting Tree Problem} we are given a tree $T$ of $n$ vertices as input. The tree is embedded in an unknown \emph{metric} space and we have unlimited access to an oracle that, given two distinct…

Data Structures and Algorithms · Computer Science 2023-05-30 Davide Bilò , Luciano Gualà , Stefano Leucci , Luca Pepè Sciarria

Packet reordering is an important property of network traffic that should be captured by analytical models of the Transmission Control Protocol (TCP). We study a combinatorial problem motivated by RESTORED, a TCP modeling methodology that…

Data Structures and Algorithms · Computer Science 2008-11-04 Anders Hansson , Gabriel Istrate

A decision tree recursively splits a feature space $\mathbb{R}^{d}$ and then assigns class labels based on the resulting partition. Decision trees have been part of the basic machine-learning toolkit for decades. A large body of work treats…

A consecutive pattern in a permutation $\pi$ is another permutation $\sigma$ determined by the relative order of a subsequence of contiguous entries of $\pi$. Traditional notions such as descents, runs and peaks can be viewed as particular…

Combinatorics · Mathematics 2015-10-23 Sergi Elizalde

We propose a new topological invariant of unlabeled trees of N nodes. The invariant is a set of Nx2 matrices of integers, with sum_j k^{d_{i,j}} and v_i as the matrix elements, where d_{i,j} are the elements of the distance matrix and v_i…

Statistical Mechanics · Physics 2007-05-23 S. Piec , K. Malarz , K. Kulakowski

Frequent pattern mining is a flagship problem in data mining. In its most basic form, it asks for the set of substrings of a given string $S$ of length $n$ that occur at least $\tau$ times in $S$, for some integer $\tau\in[1,n]$. We…

Data Structures and Algorithms · Computer Science 2025-06-06 Pengxin Bian , Panagiotis Charalampopoulos , Lorraine A. K. Ayad , Manal Mohamed , Solon P. Pissis , Grigorios Loukides

A superpermutation is a sequence that contains every permutation of $n$ distinct symbols as a contiguous substring. For instance, a valid example for three symbols is a sequence that contains all six permutations. This paper introduces a…

Discrete Mathematics · Computer Science 2025-05-19 Dhruv Ajmera

In this paper, we present fixed-parameter tractability algorithms for both the undirected and directed versions of the Spanning Tree Isomorphism Problem, parameterized by the size $k$ of a redundant set. A redundant set is a collection of…

Data Structures and Algorithms · Computer Science 2025-08-08 Fangjian Shen , Yicheng Zheng , Wushao Wen , Hankz Hankui Zhuo

We present an algorithm that takes as input an $n$-vertex planar graph $G$ and a $k$-vertex pattern graph $P$, and computes the number of (induced) copies of $P$ in $G$ in $2^{O(k/\log k)}n^{O(1)}$ time. If $P$ is a matching, independent…

Data Structures and Algorithms · Computer Science 2019-04-26 Jesper Nederlof

While Internet of Things (IoT) devices and sensors create continuous streams of information, Big Data infrastructures are deemed to handle the influx of data in real-time. One type of such a continuous stream of information is time series…

Methodology · Statistics 2020-05-05 Elyas Sabeti , Peter X. K. Song , Alfred O. Hero

Any permutation statistic $f:\sym\to\CC$ may be represented uniquely as a, possibly infinite, linear combination of (classical) permutation patterns: $f= \Sigma_\tau\lambda_f(\tau)\tau$. To provide explicit expansions for certain…

Combinatorics · Mathematics 2011-03-08 Petter Brändén , Anders Claesson

We consider the problem of counting the number of possible sets of rankings (called ranking patterns) generated by unfolding models of codimension one. We express the ranking patterns as slices of the braid arrangement and show that all…

Combinatorics · Mathematics 2011-06-10 Hidehiko Kamiya , Akimichi Takemura , Hiroaki Terao

Perfect sorting by reversals, a problem originating in computational genomics, is the process of sorting a signed permutation to either the identity or to the reversed identity permutation, by a sequence of reversals that do not break any…

Discrete Mathematics · Computer Science 2012-01-05 Mathilde Bouvel , Cedric Chauve , Marni Mishna , Dominique Rossin

For each integer k >= 2, let F(k) denote the largest n for which there exists a permutation \sigma \in S_n, all of whose patterns of length k are distinct. We prove that F(k) = k + \lfloor \sqrt{2k-3} \rfloor + e_k, where e_k \in {-1,0} for…

Combinatorics · Mathematics 2012-06-12 Peter Hegarty