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Accurate retinal vessel segmentation is a challenging problem in color fundus image analysis. An automatic retinal vessel segmentation system can effectively facilitate clinical diagnosis and ophthalmological research. Technically, this…

Image and Video Processing · Electrical Eng. & Systems 2021-03-26 Muyi Sun , Guanhong Zhang

The ability to extrapolate gene expression dynamics in living single cells requires robust cell segmentation, and one of the challenges is the amorphous or irregularly shaped cell boundaries. To address this issue, we modified the U-Net…

Quantitative Methods · Quantitative Biology 2020-01-17 Nanyan Zhu , Chen Liu , Zakary S. Singer , Tal Danino , Andrew F. Laine , Jia Guo

U-Net has been the go-to architecture for medical image segmentation tasks, however computational challenges arise when extending the U-Net architecture to 3D images. We propose the Implicit U-Net architecture that adapts the efficient…

Image and Video Processing · Electrical Eng. & Systems 2022-07-01 Sergio Naval Marimont , Giacomo Tarroni

Low-resolution image segmentation is crucial in real-world applications such as robotics, augmented reality, and large-scale scene understanding, where high-resolution data is often unavailable due to computational constraints. To address…

Computer Vision and Pattern Recognition · Computer Science 2025-05-09 Anzhe Cheng , Chenzhong Yin , Yu Chang , Heng Ping , Shixuan Li , Shahin Nazarian , Paul Bogdan

Removing skull artifacts from functional magnetic images (fMRI) is a well understood and frequently encountered problem. Because the fMRI field has grown mostly due to human studies, many new tools were developed to handle human data.…

Image and Video Processing · Electrical Eng. & Systems 2019-12-09 Sidney Pontes-Filho , Annelene Gulden Dahl , Stefano Nichele , Gustavo Borges Moreno e Mello

Purpose: Manual medical image segmentation is an exhausting and time-consuming task along with high inter-observer variability. In this study, our objective is to improve the multi-resolution image segmentation performance of U-Net…

Image and Video Processing · Electrical Eng. & Systems 2020-07-20 Simindokht Jahangard , Mohammad Hossein Zangooei , Maysam Shahedi

Hourglass networks such as the U-Net and V-Net are popular neural architectures for medical image segmentation and counting problems. Typical instances of hourglass networks contain shortcut connections between mirroring layers. These…

Computer Vision and Pattern Recognition · Computer Science 2018-06-12 Daniel Oñoro-Rubio , Mathias Niepert

Transfer learning (TL) for medical image segmentation helps deep learning models achieve more accurate performances when there are scarce medical images. This study focuses on completing segmentation of the ribs from lung ultrasound images…

Image and Video Processing · Electrical Eng. & Systems 2021-10-06 Dorothy Cheng , Edmund Y. Lam

To achieve an accurate assessment of root canal therapy, a fundamental step is to perform tooth root segmentation on oral X-ray images, in that the position of tooth root boundary is significant anatomy information in root canal therapy…

Computer Vision and Pattern Recognition · Computer Science 2021-10-01 Yunxiang Li , Shuai Wang , Jun Wang , Guodong Zeng , Wenjun Liu , Qianni Zhang , Qun Jin , Yaqi Wang

Retinal vessel segmentation is of great interest for diagnosis of retinal vascular diseases. To further improve the performance of vessel segmentation, we propose IterNet, a new model based on UNet, with the ability to find obscured details…

Image and Video Processing · Electrical Eng. & Systems 2019-12-13 Liangzhi Li , Manisha Verma , Yuta Nakashima , Hajime Nagahara , Ryo Kawasaki

Magnetic resonance imaging (MRI) enables plant scientists to non-invasively study root system development and root-soil interaction. Challenging recording conditions, such as low resolution and a high level of noise hamper the performance…

Computer Vision and Pattern Recognition · Computer Science 2020-02-24 Yi Zhao , Nils Wandel , Magdalena Landl , Andrea Schnepf , Sven Behnke

There is large consent that successful training of deep networks requires many thousand annotated training samples. In this paper, we present a network and training strategy that relies on the strong use of data augmentation to use the…

Computer Vision and Pattern Recognition · Computer Science 2015-05-19 Olaf Ronneberger , Philipp Fischer , Thomas Brox

Clinical screening with low-quality fundus images is challenging and significantly leads to misdiagnosis. This paper addresses the issue of improving the retinal image quality and vessel segmentation through retinal image restoration. More…

Image and Video Processing · Electrical Eng. & Systems 2022-10-06 Alnur Alimanov , Md Baharul Islam

Diabetic retinopathy is the most important complication of diabetes. Early diagnosis of retinal lesions helps to avoid visual loss or blindness. Due to high-resolution and small-size lesion regions, applying existing methods, such as…

Computer Vision and Pattern Recognition · Computer Science 2019-01-21 Zizheng Yan , Xiaoguang Han , Changmiao Wang , Yuda Qiu , Zixiang Xiong , Shuguang Cui

Retinal image segmentation plays an important role in automatic disease diagnosis. This task is very challenging because the complex structure and texture information are mixed in a retinal image, and distinguishing the information is…

Image and Video Processing · Electrical Eng. & Systems 2020-08-04 Shihao Zhang , Huazhu Fu , Yanwu Xu , Yanxia Liu , Mingkui Tan

Purpose: Automated distinct bone segmentation from CT scans is widely used in planning and navigation workflows. U-Net variants are known to provide excellent results in supervised semantic segmentation. However, in distinct bone…

Image and Video Processing · Electrical Eng. & Systems 2023-02-01 Eva Schnider , Julia Wolleb , Antal Huck , Mireille Toranelli , Georg Rauter , Magdalena Müller-Gerbl , Philippe C. Cattin

Ultrasound imaging plays an important role in the diagnosis of vascular lesions. Accurate segmentation of the vascular wall is important for the prevention, diagnosis and treatment of vascular diseases. However, existing methods have…

Image and Video Processing · Electrical Eng. & Systems 2022-07-29 Qinghua Huang , Lizhi Jia , Guanqing Ren , Xiaoyi Wang , Chunying Liu

Fine-tuning a network which has been trained on a large dataset is an alternative to full training in order to overcome the problem of scarce and expensive data in medical applications. While the shallow layers of the network are usually…

Image and Video Processing · Electrical Eng. & Systems 2020-02-21 Mina Amiri , Rupert Brooks , Hassan Rivaz

The detection of retinal blood vessels, especially the changes of small vessel condition is the most important indicator to identify the vascular network of the human body. Existing techniques focused mainly on shape of the large vessels,…

Image and Video Processing · Electrical Eng. & Systems 2020-09-17 Lukman Hakim , Novanto Yudistira , Muthusubash Kavitha , Takio Kurita

Neural segmentation has a great impact on the smooth implementation of local anesthesia surgery. At present, the network for the segmentation includes U-NET [1] and SegNet [2]. U-NET network has short training time and less training…

Computer Vision and Pattern Recognition · Computer Science 2017-08-17 Chenyang Xu , Mengxin Li