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Motivation: In systems biology, modelling strategies aim to decode how molecular components interact to generate dynamical behaviour. Boolean modelling is more and more used, but the description of the dynamics from two-levels components…

Molecular Networks · Quantitative Biology 2024-07-16 Nadine Ben Boina , Brigitte Mossé , Anaïs Baudot , Élisabeth Remy

PAWS is a tool to analyse the behaviour of weighted automata and conditional transition systems. At its core PAWS is based on a generic implementation of algorithms for checking language equivalence in weighted automata and bisimulation in…

Formal Languages and Automata Theory · Computer Science 2017-07-14 Barbara König , Sebastian Küpper , Christina Mika

Object counting models suffer when deployed across domains with differing density variety, since density shifts are inherently task-relevant and violate standard domain adaptation assumptions. To address this, we propose a theoretical…

Computer Vision and Pattern Recognition · Computer Science 2025-11-03 Zhuonan Liang , Dongnan Liu , Jianan Fan , Yaxuan Song , Qiang Qu , Runnan Chen , Yu Yao , Peng Fu , Weidong Cai

Causal graphical models can encode large amounts structural knowledge, both from the background knowledge of domain experts and the structural knowledge discovered from randomized experiments or observational data. However, though we may…

Machine Learning · Computer Science 2026-04-07 Katherine Avery , Chinmay Pendse , David Jensen

In this paper, we propose a novel semi-supervised feature selection framework by mining correlations among multiple tasks and apply it to different multimedia applications. Instead of independently computing the importance of features for…

Machine Learning · Computer Science 2017-07-11 Xiaojun Chang , Yi Yang

Partition refinement is a method for minimizing automata and transition systems of various types. Recently, we have developed a partition refinement algorithm that is generic in the transition type of the given system and matches the run…

Data Structures and Algorithms · Computer Science 2020-11-26 Thorsten Wißmann , Hans-Peter Deifel , Stefan Milius , Lutz Schröder

We address the problems of multi-domain and single-domain regression based on distinct and unpaired labeled training sets for each of the domains and a large unlabeled training set from all domains. We formulate these problems as a Bayesian…

Machine Learning · Statistics 2012-03-21 Tomer Michaeli , Yonina C. Eldar , Guillermo Sapiro

Models such as finite state automata are widely used to abstract the behavior of software systems by capturing the sequences of events observable during their execution. Nevertheless, models rarely exist in practice and, when they do, get…

Software Engineering · Computer Science 2024-08-20 Donato Clun , Donghwan Shin , Antonio Filieri , Domenico Bianculli

Wavelet families arise by scaling and translations of a prototype function, called the {\em {mother wavelet}}. The construction of wavelet bases for cardinal spline spaces is generally carried out within the multi-resolution analysis…

Functional Analysis · Mathematics 2009-11-13 Miroslav Andrle , Laura Rebollo-Neira

Advances in bio-technology have made available massive amounts of functional, structural and genomic data for many biological sequences. This increased availability of heterogeneous biological data has resulted in biological applications…

Computational Engineering, Finance, and Science · Computer Science 2013-02-26 Srikrishnan Divakaran , Arpit Mithal , Namit Jain

We present a novel multimodal language model approach for predicting molecular properties by combining chemical language representation with physicochemical features. Our approach, MULTIMODAL-MOLFORMER, utilizes a causal multistage feature…

We present MMbeddings, a probabilistic embedding approach that reinterprets categorical embeddings through the lens of nonlinear mixed models, effectively bridging classical statistical theory with modern deep learning. By treating…

Machine Learning · Statistics 2025-11-04 Giora Simchoni , Saharon Rosset

In this paper a framework for engineering supervisory controllers for product lines with dynamic feature configuration is proposed. The variability in valid configurations is described by a feature model. Behavior of system components is…

Systems and Control · Electrical Eng. & Systems 2023-05-17 Sander Thuijsman , Michel Reniers

The aim of this paper is the supervised classification of semi-structured data. A formal model based on bayesian classification is developed while addressing the integration of the document structure into classification tasks. We define…

Information Retrieval · Computer Science 2009-01-06 Pierre-François Marteau , Gilbas Ménier , Eugen Popovici

The design of modern recommender systems relies on understanding which parts of the feature space are relevant for solving a given recommendation task. However, real-world data sets in this domain are often characterized by their large…

Information Retrieval · Computer Science 2023-09-06 Blaž Škrlj , Blaž Mramor

The human language can be expressed through multiple sources of information known as modalities, including tones of voice, facial gestures, and spoken language. Recent multimodal learning with strong performances on human-centric tasks such…

Computation and Language · Computer Science 2020-10-06 Yao-Hung Hubert Tsai , Martin Q. Ma , Muqiao Yang , Ruslan Salakhutdinov , Louis-Philippe Morency

A canonical formalism and constraint analysis for discrete systems subject to a variational action principle are devised. The formalism is equivalent to the covariant formulation, encompasses global and local discrete time evolution moves…

Mathematical Physics · Physics 2013-09-17 Bianca Dittrich , Philipp A Hoehn

Learning a distribution conditional on a set of discrete-valued features is a commonly encountered task. This becomes more challenging with a high-dimensional feature set when there is the possibility of interaction between the features. In…

Machine Learning · Statistics 2013-05-01 David C. Kessler , Jack Taylor , David B. Dunson

This study investigates the diverse characteristics of nouns, focusing on both semantic (e.g., countable/uncountable) and morphosyntactic (e.g., masculine/feminine) distinctions. We explore inter-word variations for gender markers in noun…

Computation and Language · Computer Science 2026-03-06 Mohamed El Idrissi

This paper introduces layout-aware graph modeling for multimodal RAG. Different from traditional RAG methods that mostly deal with flat text chunks, the proposed method takes into account the relationship of multimodalities by using a graph…

Computation and Language · Computer Science 2025-03-10 Jeff Yang , Duy-Khanh Vu , Minh-Tien Nguyen , Xuan-Quang Nguyen , Linh Nguyen , Hung Le