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Learning meaningful and interpretable representations from high-dimensional volumetric magnetic resonance (MR) images is essential for advancing personalized medicine. While Vision Transformers (ViTs) have shown promise in handling image…

Computer Vision and Pattern Recognition · Computer Science 2024-09-13 Qingqiao Hu , Daoan Zhang , Jiebo Luo , Zhenyu Gong , Benedikt Wiestler , Jianguo Zhang , Hongwei Bran Li

Self-supervised representation learning has been highly promising for histopathology image analysis with numerous approaches leveraging their patient-slide-patch hierarchy to learn better representations. In this paper, we explore how the…

Computer Vision and Pattern Recognition · Computer Science 2024-03-22 Hasindri Watawana , Kanchana Ranasinghe , Tariq Mahmood , Muzammal Naseer , Salman Khan , Fahad Shahbaz Khan

Neural network representation learning frameworks have recently shown to be highly effective at a wide range of tasks ranging from radiography interpretation via data-driven diagnostics to clinical decision support. This often superior…

Information Retrieval · Computer Science 2018-11-14 Xing Wei , Carsten Eickhoff

Constructing large-scale labeled datasets for multi-modal perception model training in autonomous driving presents significant challenges. This has motivated the development of self-supervised pretraining strategies. However, existing…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Xiaohao Xu , Ye Li , Tianyi Zhang , Jinrong Yang , Matthew Johnson-Roberson , Xiaonan Huang

The success of machine learning algorithms is inherently related to the extraction of meaningful features, as they play a pivotal role in the performance of these algorithms. Central to this challenge is the quality of data representation.…

Image and Video Processing · Electrical Eng. & Systems 2025-07-10 Weronika Hryniewska-Guzik , Przemyslaw Biecek

The performance of existing supervised neuron segmentation methods is highly dependent on the number of accurate annotations, especially when applied to large scale electron microscopy (EM) data. By extracting semantic information from…

Computer Vision and Pattern Recognition · Computer Science 2023-10-09 Yinda Chen , Wei Huang , Shenglong Zhou , Qi Chen , Zhiwei Xiong

Pre-training has shown success in different areas of machine learning, such as Computer Vision, Natural Language Processing (NLP), and medical imaging. However, it has not been fully explored for clinical data analysis. An immense amount of…

Machine Learning · Computer Science 2023-07-18 Chantal Pellegrini , Nassir Navab , Anees Kazi

Machine learning methods offer great promise for fast and accurate detection and prognostication of COVID-19 from standard-of-care chest radiographs (CXR) and computed tomography (CT) images. Many articles have been published in 2020…

Missing input sequences are common in medical imaging data, posing a challenge for deep learning models reliant on complete input data. In this work, inspired by MultiMAE [2], we develop a masked autoencoder (MAE) paradigm for multi-modal,…

Computer Vision and Pattern Recognition · Computer Science 2026-02-04 Ayhan Can Erdur , Christian Beischl , Daniel Scholz , Jiazhen Pan , Benedikt Wiestler , Daniel Rueckert , Jan C Peeken

Background: Differentiating radiation necrosis (RN) from tumor progression after stereotactic radiosurgery (SRS) remains a critical challenge in brain metastases. While histopathology represents the gold standard, its invasiveness limits…

Since the beginning of the COVID-19 pandemic, researchers have developed deep learning models to classify COVID-19 induced pneumonia. As with many medical imaging tasks, the quality and quantity of the available data is often limited. In…

Image and Video Processing · Electrical Eng. & Systems 2021-12-15 Daniel Schaudt , Christopher Kloth , Christian Spaete , Andreas Hinteregger , Meinrad Beer , Reinhold von Schwerin

Medical imaging tasks are very challenging due to the lack of publicly available labeled datasets. Hence, it is difficult to achieve high performance with existing deep-learning models as they require a massive labeled dataset to be trained…

Image and Video Processing · Electrical Eng. & Systems 2024-07-23 Anubhav Gupta , Islam Osman , Mohamed S. Shehata , John W. Braun

Advancements in machine learning algorithms have had a beneficial impact on representation learning, classification, and prediction models built using electronic health record (EHR) data. Effort has been put both on increasing models'…

Machine Learning · Computer Science 2021-03-24 Yiwen Meng , William Speier , Michael K. Ong , Corey W. Arnold

Egocentric human mesh recovery (HMR) from monocular head-mounted cameras is increasingly important for AR/VR applications, but remains challenging due to the lack of reliable ground-truth (GT) annotations based on parametric human body…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Soyeon Na , Seung Young Noh , Ju Yong Chang

The recent progress of computing, machine learning, and especially deep learning, for image recognition brings a meaningful effect for automatic detection of various diseases from chest X-ray images (CXRs). Here efficiency of lung…

Machine Learning · Computer Science 2018-11-21 Yu. Gordienko , Peng Gang , Jiang Hui , Wei Zeng , Yu. Kochura , O. Alienin , O. Rokovyi , S. Stirenko

The ability to predict lung and heart based diseases using deep learning techniques is central to many researchers, particularly in the medical field around the world. In this paper, we present a unique outlook of a very familiar problem of…

Computer Vision and Pattern Recognition · Computer Science 2022-03-30 Sairamvinay Vijayaraghavan , David Haddad , Shikun Huang , Seongwoo Choi

High-quality magnetic resonance (MR) image, i.e., with near isotropic voxel spacing, is desirable in various scenarios of medical image analysis. However, many MR acquisitions use large inter-slice spacing in clinical practice. In this…

Image and Video Processing · Electrical Eng. & Systems 2021-08-18 Kai Xuan , Liping Si , Lichi Zhang , Zhong Xue , Yining Jiao , Weiwu Yao , Dinggang Shen , Dijia Wu , Qian Wang

Chest X-rays remain the primary diagnostic tool in emergency medicine, yet their limited ability to capture fine anatomical details can result in missed or delayed diagnoses. To address this, we introduce XVertNet, a novel deep-learning…

Image and Video Processing · Electrical Eng. & Systems 2025-09-03 Ella Eidlin , Assaf Hoogi , Hila Rozen , Mohammad Badarne , Nathan S. Netanyahu

This study investigates the impact of self-supervised pretraining of 3D semantic segmentation models on a large-scale, domain-specific dataset. We introduce BRAINS-45K, a dataset of 44,756 brain MRI volumes from public sources, the largest…

Image and Video Processing · Electrical Eng. & Systems 2024-08-16 Asbjørn Munk , Jakob Ambsdorf , Sebastian Llambias , Mads Nielsen

Distributed representations of medical concepts have been used to support downstream clinical tasks recently. Electronic Health Records (EHR) capture different aspects of patients' hospital encounters and serve as a rich source for…

Computation and Language · Computer Science 2020-01-07 Shaika Chowdhury , Chenwei Zhang , Philip S. Yu , Yuan Luo