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Hemodynamics in the aorta from computational fluid dynamics (CFD) simulations can provide a comprehensive analysis of relevant cardiovascular diseases. Coupling the three-element Windkessel model with the patient-specific CFD simulation to…

Fluid Dynamics · Physics 2022-07-14 Zongze Li , Wenbin Mao

Accurate cardiac computing, analysis and modeling from multi-modality images are important for the diagnosis and treatment of cardiac disease. Late gadolinium enhancement magnetic resonance imaging (LGE MRI) is a promising technique to…

Image and Video Processing · Electrical Eng. & Systems 2021-11-10 Lei Li , Fuping Wu , Sihang Wang , Xiahai Zhuang

In visual computing, 3D geometry is represented in many different forms including meshes, point clouds, voxel grids, level sets, and depth images. Each representation is suited for different tasks thus making the transformation of one…

Computer Vision and Pattern Recognition · Computer Science 2022-09-02 Trevor Houchens , Cheng-You Lu , Shivam Duggal , Rao Fu , Srinath Sridhar

Recent advancements in AI have significantly transformed medical imaging, particularly in angiography, by enhancing diagnostic precision and patient care. However existing works are limited in analyzing the aorta and iliac arteries, above…

Computer Vision and Pattern Recognition · Computer Science 2024-04-29 Vazgen Zohranyan , Vagner Navasardyan , Hayk Navasardyan , Jan Borggrefe , Shant Navasardyan

Prediction of the blood flow characteristics is of utmost importance for understanding the behavior of the blood arterial network, especially in the presence of vascular diseases such as stenosis. Computational fluid dynamics (CFD) has…

Machine Learning · Computer Science 2021-11-11 Mohammad Farajtabar , Mohit Biglarian , Morteza Miansari

Determining brain hemodynamics plays a critical role in the diagnosis and treatment of various cerebrovascular diseases. In this work, we put forth a physics-informed deep learning framework that augments sparse clinical measurements with…

Medical Physics · Physics 2021-08-27 Mohammad Sarabian , Hessam Babaee , Kaveh Laksari

Functional analysis of the left atrium (LA) plays an increasingly important role in the prognosis and diagnosis of cardiovascular diseases. Echocardiography-based measurements of LA dimensions and strains are useful biomarkers, but they…

Image and Video Processing · Electrical Eng. & Systems 2023-09-06 Christoforos Galazis , Anil Anthony Bharath , Marta Varela

Personalized 3D vascular models can aid in a range of diagnostic, prognostic, and treatment-planning tasks relevant to cardiovascular disease management. Deep learning provides a means to obtain such models automatically from image data.…

Image and Video Processing · Electrical Eng. & Systems 2024-08-20 Patryk Rygiel , Dieuwertje Alblas , Christoph Brune , Kak Khee Yeung , Jelmer M. Wolterink

Continuous monitoring of cardiac activity is paramount to understanding the functioning of the heart in addition to identifying precursors to conditions such as Atrial Fibrillation. Through continuous cardiac monitoring, early indications…

Machine Learning · Computer Science 2020-10-13 Prithvi Suresh , Naveen Narayanan , Chakilam Vijay Pranav , Vineeth Vijayaraghavan

Medical image segmentation is one of the important tasks of computer-aided diagnosis in medical image analysis. Since most medical images have the characteristics of blurred boundaries and uneven intensity distribution, through existing…

Computer Vision and Pattern Recognition · Computer Science 2021-06-09 Sixing Yin , Yameng Han , Shufang Li

We propose a deep learning method to model and generate synthetic aortic shapes based on representing shapes as the zero-level set of a neural signed distance field, conditioned by a family of trainable embedding vectors with encode the…

Computer Vision and Pattern Recognition · Computer Science 2024-09-25 Andrei Gasparovici , Alex Serban

We propose a method based on deep learning to perform cardiac segmentation on short axis MRI image stacks iteratively from the top slice (around the base) to the bottom slice (around the apex). At each iteration, a novel variant of U-net is…

Computer Vision and Pattern Recognition · Computer Science 2018-04-26 Qiao Zheng , Hervé Delingette , Nicolas Duchateau , Nicholas Ayache

Automatic segmentation of myocardium in Late Gadolinium Enhanced (LGE) Cardiac MR (CMR) images is often difficult due to the intensity heterogeneity resulting from accumulation of contrast agent in infarcted areas. In this paper, we propose…

Image and Video Processing · Electrical Eng. & Systems 2022-05-24 Dong Wei , Ying Sun , Ping Chai , Adrian Low , Sim Heng Ong

Light-field microscopy (LFM) enables rapid volumetric imaging through single-frame acquisition and fast 3D reconstruction algorithms. The high speed and low phototoxicity of LFM make it highly suitable for real-time 3D fluorescence imaging,…

Optics · Physics 2025-02-24 Bohan Qu , Zhouyu Jin , You Zhou , Bo Xiong , Xun Cao

Many strides have been made in semantic segmentation of multiple classes within an image. This has been largely due to advancements in deep learning and convolutional neural networks (CNNs). Features within a CNN are automatically learned…

Image and Video Processing · Electrical Eng. & Systems 2019-09-17 Erik Gaasedelen , Alex Deakyne , Paul Iaizzo

Voltage-sensitive fluorescence imaging is widely used to image action potential waves in the heart. However, while the electrical waves trigger mechanical contraction, imaging needs to be performed with pharmacologically…

Medical Physics · Physics 2026-03-12 Shrey Chowdhary , Jan Lebert , Shai Dickman , Charles Gordon , Jan Christoph

We propose a deep learning-based automatic coronary artery tree centerline tracker (AuCoTrack) extending the vessel tracker by Wolterink (arXiv:1810.03143). A dual pathway Convolutional Neural Network (CNN) operating on multi-scale 3D…

Image and Video Processing · Electrical Eng. & Systems 2023-11-27 Zohaib Salahuddin , Matthias Lenga , Hannes Nickisch

Understanding the movement of the left ventricle myocardium (LVmyo) during the cardiac cycle is essential for assessing cardiac function. One way to model this movement is through a series of deformable image registrations (DIRs) of the…

Image and Video Processing · Electrical Eng. & Systems 2025-01-14 Mathias Micheelsen Lowes , Jonas Jalili Pedersen , Bjørn S. Hansen , Klaus Fuglsang Kofoed , Maxime Sermesant , Rasmus R. Paulsen

Cardiac deformation is a crucial biomarker for the evaluation of cardiac function. Current methods for estimating cardiac strain might underestimate local deformation due to through-plane motion and segmental averaging. Mesh-based mapping…

Tissues and Organs · Quantitative Biology 2025-04-07 Beatrice Moscoloni , Patrick Segers , Mathias Peirlinck

The left atrium (LA) plays a pivotal role in modulating left ventricular filling, but our comprehension of its hemodynamics is significantly limited by the constraints of conventional ultrasound analysis. 4D flow magnetic resonance imaging…

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