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Signatures of glassy dynamics have been identified experimentally for a rich variety of materials in which molecular networks provide rigidity. Here we present a theoretical framework to study the glassy behavior of both passive and active…

Statistical Mechanics · Physics 2013-03-26 Shenshen Wang , Peter G. Wolynes

Active networks made of biopolymers and motor proteins are valuable bioinspired systems that have been used in the last decades to study the cytoskeleton and its self-organization under mechanical stimulation. Different techniques are…

Soft Condensed Matter · Physics 2023-05-15 Vahid Nasirimarekani , Olinka Ramìrez-Soto , Stefan Karpitschka , Isabella Guido

We introduce and solve a model which considers two coupled networks growing simultaneously. The dynamics of the networks is governed by the new arrival of network elements (nodes) making preferential attachments to pre-existing nodes in…

Statistical Mechanics · Physics 2007-05-23 Dafang Zheng , Guler Ergun

A model of an evolving network of interacting molecular species is shown to exhibit repeated rounds of crashes in which several species get rapidly depopulated, followed by recoveries. The network inevitably self-organizes into an…

Adaptation and Self-Organizing Systems · Physics 2009-11-07 Sanjay Jain , Sandeep Krishna

We investigate interface failure of model materials representing architected thin films in contact with heterogeneous substrates. We find that, while systems with statistically isotropic distributions of impurities derive their fracture…

Materials Science · Physics 2024-05-30 Christian Greff , Paolo Moretti , Michael Zaiser

Collagen is the most abundant extracellular-network-forming protein in animal biology and is important in both natural and artificial tissues, where it serves as a material of great mechanical versatility. This versatility arises from its…

Soft Condensed Matter · Physics 2009-07-13 D. Vader , A. Kabla , D. Weitz , L. Mahadevan

We report a molecularly-augmented continuum-based computational model of dynamic wetting and apply it to the displacement of an externally-driven liquid plug between two partially-wetted parallel plates. The results closely follow those…

Fluid Dynamics · Physics 2022-12-21 Jack S. Keeler , Terence D. Blake , Duncan A. Lockerby , James E. Sprittles

Stiffness degradation and progressive failure of composite laminates are complex processes involving evolution and multi-mode interactions among fiber fractures, intra-ply matrix cracks and inter-ply delaminations. This paper presents a…

Numerical Analysis · Mathematics 2023-11-06 Jiakun Liu , Stuart Leigh Phoenix

Molecules with versatile functionalities and well-defined structures, can serve as building blocks for extreme nanoscale devices. This requires their precise integration into functional heterojunctions, most commonly in the form of…

Fivefold-twinned metal nanoparticles host a central wedge disclination that strongly influences their mechanical and catalytic properties. Yet the atomistic mechanisms governing the stability, migration, and annihilation of this topological…

Mesoscale and Nanoscale Physics · Physics 2026-04-21 Silvia Fasce , Diana Nelli , Luca Benzi , Georg Daniel Förster , Riccardo Ferrando

Generative modeling is typically framed as learning mapping rules, but from an observer's perspective without access to these rules, the task becomes disentangling the geometric support from the probability distribution. We propose that…

Machine Learning · Statistics 2025-12-04 Rui Tong

Microtubules are filamentous tubular protein polymers which are essential for a range of cellular behaviour, and are generally straight over micron length scales. However, in some gliding assays, where microtubules move over a carpet of…

Subcellular Processes · Quantitative Biology 2018-08-02 Simon P Pearce , Matthias Heil , Oliver E Jensen , Gareth W Jones , Andreas Prokop

Indentation is a common experimental technique to study the mechanics of polymeric materials. The main advantage of using indentation is because this provides a direct correlation between the microstructure and the small-scale mechanical…

Soft Condensed Matter · Physics 2022-07-20 Manoj Kumar Maurya , Céline Ruscher , Debashish Mukherji , Manjesh Kumar Singh

Cytoskeletal crowding plays a key role in the diffusion of DNA molecules through the cell, acting as a barrier to effective intracellular transport and conformational stability required for such processes as transfection, viral infection,…

Real networks often grow through the sequential addition of new nodes that connect to older ones in the graph. However, many real systems evolve through the branching of fundamental units, whether those be scientific fields, countries, or…

Physics and Society · Physics 2020-06-30 Muhua Zheng , Guillermo García-Pérez , Marián Boguñá , M. Ángeles Serrano

Diffusion-driven instability is a fundamental mechanism underlying pattern formation in spatially extended systems. In almost all existing works, diffusion across the links of the underlying network is modeled through scalar weights,…

Statistical Mechanics · Physics 2026-02-16 Anna Gallo , Wilfried Segnou , Timoteo Carletti

Topological defects are fundamental to the collective dynamics of non-equilibrium systems and in active matter, mediating spontaneous flows, dynamic self-organization, and emergent pattern formation. Here, we reveal critical states in…

Model merging unifies independently fine-tuned LLMs from the same base, enabling reuse and integration of parallel development efforts without retraining. However, in practice we observe that merging does not always succeed: certain…

Artificial Intelligence · Computer Science 2026-03-11 Yuan Cao , Dezhi Ran , Yuzhe Guo , Mengzhou Wu , Simin Chen , Linyi Li , Wei Yang , Tao Xie

We consider the dynamics of a reaction-diffusion system on a multigraph. The species share the same set of nodes but can access different links to explore the embedding spatial support. By acting on the topology of the networks we can…

Statistical Mechanics · Physics 2016-12-21 Malbor Asllani , Timoteo Carletti , Duccio Fanelli

Living systems are capable of locomotion, reconfiguration, and replication. To perform these tasks, cells spatiotemporally coordinate the interactions of force-generating, "active" molecules that create and manipulate non-equilibrium…

Soft Condensed Matter · Physics 2019-08-28 Tyler D. Ross , Heun Jin Lee , Zijie Qu , Rachel A. Banks , Rob Phillips , Matt Thomson
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