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Accurate biodiversity monitoring is essential for effective environmental policy, yet current practices often rely on arbitrarily defined ecosystems, communities, and ad-hoc indicator species, limiting cost-efficiency and reproducibility.…

Applications · Statistics 2025-12-02 Braden Scherting , Otso Ovaskainen , Tomas Roslin , David B. Dunson

Camera traps generate millions of wildlife images, yet many datasets contain species that are absent from existing classifiers. This work evaluates zero-shot approaches for organizing unlabeled wildlife imagery using self-supervised vision…

Computer Vision and Pattern Recognition · Computer Science 2025-10-17 Hugo Markoff , Jevgenijs Galaktionovs

The BIOSCAN project, led by the International Barcode of Life Consortium, seeks to study changes in biodiversity on a global scale. One component of the project is focused on studying the species interaction and dynamics of all insects. In…

Computer Vision and Pattern Recognition · Computer Science 2022-11-07 Nicholas Pellegrino , Zahra Gharaee , Paul Fieguth

Fine-grained visual classification aims to recognize objects belonging to many subordinate categories of a supercategory, where appearance alone often fails to distinguish highly similar classes. We propose a unified framework that…

Computer Vision and Pattern Recognition · Computer Science 2025-10-21 Sumit Mamtani , Yash Thesia

Image-based yield detection in agriculture could raiseharvest efficiency and cultivation performance of farms. Following this goal, this research focuses on improving instance segmentation of field crops under varying environmental…

Computer Vision and Pattern Recognition · Computer Science 2021-04-01 Nils Lüling , David Reiser , Alexander Stana , H. W. Griepentrog

This paper shows experimental results on learning based randomized bin-picking combined with iterative visual recognition. We use the random forest to predict whether or not a robot will successfully pick an object for given depth images of…

Robotics · Computer Science 2018-05-23 Kensuke Harada , Weiwei Wan , Tokuo Tsuji , Kohei Kikuchi , Kazuyuki Nagata , Hiromu Onda

There has been a recent emergence of sampling-based techniques for estimating epistemic uncertainty in deep neural networks. While these methods can be applied to classification or semantic segmentation tasks by simply averaging samples,…

Computer Vision and Pattern Recognition · Computer Science 2019-03-08 Dimity Miller , Feras Dayoub , Michael Milford , Niko Sünderhauf

Computer vision based fine-grained recognition has received great attention in recent years. Existing works focus on discriminative part localization and feature learning. In this paper, to improve the performance of fine-grained…

Computer Vision and Pattern Recognition · Computer Science 2018-08-15 Hui Feng , Shanshan Wang , Shuzhi Sam Ge

We consider the possible gain in the measurement of lensing shear from imaging data in multiple filters. Galaxy shapes may differ significantly across filters, so that the same galaxy offers multiple samples of the shear. On the other…

Astrophysics · Physics 2008-11-26 Mike Jarvis , Bhuvnesh Jain

Automatic identification of plant specimens from amateur photographs could improve species range maps, thus supporting ecosystems research as well as conservation efforts. However, classifying plant specimens based on image data alone is…

Computer Vision and Pattern Recognition · Computer Science 2021-10-06 Riccardo de Lutio , Yihang She , Stefano D'Aronco , Stefania Russo , Philipp Brun , Jan D. Wegner , Konrad Schindler

Existing image classification datasets used in computer vision tend to have a uniform distribution of images across object categories. In contrast, the natural world is heavily imbalanced, as some species are more abundant and easier to…

Computer Vision and Pattern Recognition · Computer Science 2018-04-12 Grant Van Horn , Oisin Mac Aodha , Yang Song , Yin Cui , Chen Sun , Alex Shepard , Hartwig Adam , Pietro Perona , Serge Belongie

Animal sounds can be recognised automatically by machine learning, and this has an important role to play in biodiversity monitoring. Yet despite increasingly impressive capabilities, bioacoustic species classifiers still exhibit imbalanced…

In the following paper, we present and discuss challenging applications for fine-grained visual classification (FGVC): biodiversity and species analysis. We not only give details about two challenging new datasets suitable for computer…

Computer Vision and Pattern Recognition · Computer Science 2015-07-06 Erik Rodner , Marcel Simon , Gunnar Brehm , Stephanie Pietsch , J. Wolfgang Wägele , Joachim Denzler

We consider the challenges that arise when fitting complex ecological models to 'large' data sets. In particular, we focus on random effect models which are commonly used to describe individual heterogeneity, often present in ecological…

Methodology · Statistics 2022-05-17 Ruth King , Blanca Sarzo , Víctor Elvira

Predicting protein-protein interactions from sequences is an important goal of computational biology. Various sources of information can be used to this end. Starting from the sequences of two interacting protein families, one can use…

Biomolecules · Quantitative Biology 2023-04-26 Carlos A. Gandarilla-Perez , Sergio Pinilla , Anne-Florence Bitbol , Martin Weigt

Birds are important indicators for monitoring both biodiversity and habitat health; they also play a crucial role in ecosystem management. Decline in bird populations can result in reduced eco-system services, including seed dispersal,…

Computer Vision and Pattern Recognition · Computer Science 2023-05-04 Carl Chalmers , Paul Fergus , Serge Wich , Steven N Longmore , Naomi Davies Walsh , Philip Stephens , Chris Sutherland , Naomi Matthews , Jens Mudde , Amira Nuseibeh

Video analysis is currently the main non-intrusive method for the study of collective behavior. However, 3D-to-2D projection leads to overlapping of observed objects. The situation is further complicated by the absence of stall shapes for…

Quantitative Methods · Quantitative Biology 2019-07-05 K. Lonhus , D. Štys , M. Saberioon , R. Rychtáriková

Marine microalgae are widespread in the ocean and play a crucial role in the ecosystem. Automatic identification and location of marine microalgae in microscopy images would help establish marine ecological environment monitoring and water…

Computer Vision and Pattern Recognition · Computer Science 2024-08-27 Shizheng Zhou , Juntao Jiang , Xiaohan Hong , Yan Hong , Pengcheng Fu

Model merging offers an effective way to integrate the capabilities of multiple fine-tuned models. However, the performance degradation of the merged model remains a challenge, particularly when none or few data are available. This paper…

Machine Learning · Computer Science 2025-05-28 Jing Xu , Jiazheng Li , Jingzhao Zhang

Despite the common misconception of nearly static organisms, plants do interact continuously with the environment and with each other. It is fair to assume that during their evolution they developed particular features to overcome problems…

Populations and Evolution · Quantitative Biology 2016-02-19 Gianna Vivaldo , Elisa Masi , Camilla Pandolfi , Stefano Mancuso , Guido Caldarelli
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