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Background: A subset of histo-blood group antigens including ABO and Lewis are oligosaccharide structures which may be conjugated to lipids or proteins. They are known to be important recognition motifs not only in the context of blood…

Tissues and Organs · Quantitative Biology 2019-03-08 Viktoria Dotz , Manfred Wuhrer

Red blood cells are known to form aggregates in the form of rouleaux. This aggregation process is believed to be reversible, but there is still no full understanding on the binding mechanism. There are at least two competing models, based…

Biological Physics · Physics 2015-06-17 C. Wagner , P. Steffen , S. Svetina

Many lipid membrane-mediated transport processes--such as mechanically-gated channel activation and solute transport--involve structural and dynamical features on membrane thickness length scales. Most existing membrane models, however,…

Soft Condensed Matter · Physics 2025-08-29 Zachary G. Lipel , Yannick A. D. Omar , Dimitrios Fraggedakis

Microbial communities display extreme diversity. A variety of strains or species coexist even when limited by a single resource. It has been argued that metabolite secretion creates new niches and facilitates such diversity. Nonetheless, it…

Populations and Evolution · Quantitative Biology 2020-02-05 Jumpei F Yamagishi , Nen Saito , Kunihiko Kaneko

The elastic moduli of tissues are connected to their states of health and function. The epithelial monolayer is a simple, minimal, tissue model that is often used to gain understanding of mechanical behavior at the cellular or…

Soft Condensed Matter · Physics 2024-12-13 Steven J. Chisolm , Emily Guo , Vignesh Subramaniam , Kyle D. Schulze , Thomas E. Angelini

Morphogenesis, tissue regeneration and cancer invasion involve transitions in tissue morphology. These transitions, caused by collective cell migration (CCM), have been interpreted as active wetting/de-wetting transitions. This phenomenon…

Cell Behavior · Quantitative Biology 2022-08-29 Ivana Pajic-Lijakovic , Milan Milivojevic

Diffusion in cell membranes is not just simple two-dimensional Brownian motion, but typically depends on the timescale of the observation. The physical origins of this anomalous sub-diffusion are unresolved, and model systems capable of…

Biological Physics · Physics 2017-10-25 H. L. E. Coker , M. R. Cheetham , D. R. Kattnig , Y. J. Wang , S. Garcia-Manyes , M. I. Wallace

We report the phenomenon of periodic shape oscillations occurring in 3T3 fibroblasts merely as a consequence of a loss of cell-substrate adhesion. The oscillatory behavior can last many hours at a constant frequency, and can be switched off…

Biological Physics · Physics 2007-05-23 Pramod A Pullarkat

Fine manipulation of fluid flows at the microscale has a tremendous impact on mass transport phenomena of chemical and biological processes inside microfluidic platforms. Fluid mixing in the laminar flow regime at low Reynolds is poorly…

Phototaxis is a light driven self-locomotion of mass and a common phenomenon in motile organisms with varieties of motility such as in bacteria, algae, etc. In naturally occurring organisms, mechanical force is generated utilising their…

Soft Condensed Matter · Physics 2023-08-11 Somnath Koley , Karuna Kar Nanda

The cytoplasm of a living cell is crowded with several macromolecules of different shapes and sizes. Molecular diffusion in such a medium becomes anomalous due to the presence of macromolecules and diffusivity is expected to decrease with…

Statistical Mechanics · Physics 2009-11-13 Manish Agrawal , S. B. Santra , Rajat Anand , Rajaram Swaminathan

The formation of a collectively moving group benefits individuals within a population in a variety of ways such as ultra-sensitivity to perturbation, collective modes of feeding, and protection from environmental stress. While some…

Biological Physics · Physics 2014-10-28 Shashi Thutupalli , Mingzhai Sun , Filiz Bunyak , Kannappan Palaniappan , Joshua. W. Shaevitz

Cellular metabolism, the integrated interconversion of thousands of metabolic substrates through enzyme-catalyzed biochemical reactions, is the most investigated complex intercellular web of molecular interactions. While the topological…

Molecular Networks · Quantitative Biology 2015-06-26 E. Almaas , B. Kovacs , T. Vicsek , Z. N. Oltvai , A. -L. Barabasi

Chemotaxis receptors in E. coli form clusters at the cell poles and also laterally along the cell body, and this clustering plays an important role in signal transduction. Recently, experiments using flourrescence imaging have shown that,…

Statistical Mechanics · Physics 2008-11-29 Hui Wang , Ned S. Wingreen , Ranjan Mukhopadhyay

Biomolecular condensates are liquid- or gel-like droplets of proteins and nucleic acids formed at least in part through liquid-liquid phase separation. Condensates enable diverse functions of cells and the pathogens that infect them,…

Soft Condensed Matter · Physics 2025-05-16 Layne B. Frechette , Naren Sundararajan , Fernando Caballero , Anthony Trubiano , Michael F. Hagan

The $L_\alpha$ phase of lipid bilayers is a fluid self-assembled state, key to the formulation of cosmetics, detergents and pharmaceutics. Despite having been extensively scrutinized in self-assembled phospholipid or surfactant bilayers,…

Silk cocoons are reconstituted into an aqueous suspension, and protein stability is investigated by comparing the protein's response to hydrochloric acid and sodium chloride. Aggregation occurs at <8 mM hydrochloric acid that is not…

Soft Condensed Matter · Physics 2017-08-16 A. Pasha Tabatabai , Katie M. Weigandt , Daniel L. Blair

Homogeneous suspensions of red blood cells (RBCs or erythrocytes) in blood plasma are unstable in the absence of driving forces and form elongated stacks, called rouleau. These erythrocyte aggregates are often branched porous networks -- a…

Soft Condensed Matter · Physics 2024-03-29 Megha Yadav , Vanshika , Chamkor Singh

Internalization of particles by cells plays a crucial role for adsorbing nutrients and fighting infection. Endocytosis is one of the most important mechanisms of the particles uptake which encompass multiple pathways. Although endocytosis…

Soft Condensed Matter · Physics 2020-01-28 Amir Khosravanizadeh , Pierre Sens , Farshid Mohammad-Rafiee

We measure different contributions to entropy production in a living functional epithelial tissue. We do this by extracting the functional dynamics of development while at the same time quantifying fluctuations. Using the translucent…

Soft Condensed Matter · Physics 2023-01-25 Mark Olenik , Jake Turley , Stephen Cross , Helen Weavers , Paul Martin , Isaac Chenchiah , Tanniemola Liverpool
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