Related papers: ACES: Automatic Cohort Extraction System for Event…
Continual Learning (CL) is an emerging machine learning paradigm that aims to learn from a continuous stream of tasks without forgetting knowledge learned from the previous tasks. To avoid performance decrease caused by forgetting, prior…
Medical texts, particularly electronic medical records (EMRs), are a cornerstone of modern healthcare, capturing critical information about patient care, diagnoses, and treatments. These texts hold immense potential for advancing clinical…
We present a system for rapidly customizing event extraction capability to find new event types and their arguments. The system allows a user to find, expand and filter event triggers for a new event type by exploring an unannotated corpus.…
The extraction of critical patient information from Electronic Health Records (EHRs) poses significant challenges due to the complexity and unstructured nature of the data. Traditional machine learning approaches often fail to capture…
Large Language Models have demonstrated profound utility in the medical domain. However, their application to autonomous Electronic Health Records~(EHRs) navigation remains constrained by a reliance on curated inputs and simplified…
Introduction: An approach to building a hybrid simulation of patient flow is introduced with a combination of data-driven methods for automation of model identification. The approach is described with a conceptual framework and basic…
Event extraction (EE) is a crucial information extraction task that aims to extract event information in texts. Most existing methods assume that events appear in sentences without overlaps, which are not applicable to the complicated…
Clinical cohort definition is crucial for patient recruitment and observational studies, yet translating inclusion/exclusion criteria into SQL queries remains challenging and manual. We present an automated system utilizing large language…
In this paper, we propose a new system called ASET that allows users to perform structured explorations of text collections in an ad-hoc manner. The main idea of ASET is to use a new two-phase approach that first extracts a superset of…
Electronic health records (EHRs) are invaluable for clinical research, yet privacy concerns severely restrict data sharing. Synthetic data generation offers a promising solution, but EHRs present unique challenges: they contain both…
Event stream data often exhibit hierarchical structure in which multiple events co-occur, resulting in a sequence of multisets (i.e., bags of events). In electronic health records (EHRs), for example, medical events are grouped into a…
A Data Access Statement (DAS) is a formal declaration detailing how and where the underlying research data associated with a publication can be accessed. It promotes transparency, reproducibility, and compliance with funder and publisher…
Global health surveillance is currently facing a challenge of Knowledge Gaps. While general-purpose AI has proliferated, it remains fundamentally unsuited for the high-stakes epidemiological domain due to chronic hallucinations and an…
As modern data pipelines continue to collect, produce, and store a variety of data formats, extracting and combining value from traditional and context-rich sources such as strings, text, video, audio, and logs becomes a manual process…
Biomedical Event Extraction (BEE) is a challenging task that involves modeling complex relationships between fine-grained entities in biomedical text. BEE has traditionally been formulated as a classification problem. With recent…
Retrieving events from large-scale video datasets is challenging due to complex temporal, spatial, and multimodal information. This paper presents U-CESE, our solution for the AI Challenge HCMC 2025, a Unified Clip-based Event Search Engine…
Machine learning (ML) approaches have demonstrated promising results in a wide range of healthcare applications. Data plays a crucial role in developing ML-based healthcare systems that directly affect people's lives. Many of the ethical…
Clinical Cohort Studies (CCS), such as randomized clinical trials, are a great source of documented clinical research. Ideally, a clinical expert inspects these articles for exploratory analysis ranging from drug discovery for evaluating…
Electronic health records (EHRs) are long, noisy, and often redundant, posing a major challenge for the clinicians who must navigate them. Large language models (LLMs) offer a promising solution for extracting and reasoning over this…
A consequence of the fragmented and siloed healthcare landscape is that patient care (and data) is split along multitude of different facilities and computer systems and enabling interoperability between these systems is hard. The lack…