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We deal with first-order definability in the substructure ordering $(\mathcal{D}; \sqsubseteq)$ of finite directed graphs. In two papers, the author has already investigated the first-order language of the embeddability ordering $(…

Logic · Mathematics 2021-01-22 Ádám Kunos

Letters $x$ and $y$ alternate in a word $w$ if after deleting in $w$ all letters but the copies of $x$ and $y$ we either obtain a word $xyxy\cdots$ (of even or odd length) or a word $yxyx\cdots$ (of even or odd length). A graph $G=(V,E)$ is…

Combinatorics · Mathematics 2017-05-18 Sergey Kitaev

In this paper we investigate the growth rate of the number of all possible paths in graphs with respect to their length in an exact analytical way. Apart from the typical rates of growth, i.e. exponential or polynomial, we identify…

Dynamical Systems · Mathematics 2007-05-23 Vasileios Basios , Gian-Luigi Forti , Gregoire Nicolis

Network-based modeling of complex systems and data using the language of graphs has become an essential topic across a range of different disciplines. Arguably, this graph-based perspective derives its success from the relative simplicity…

Social and Information Networks · Computer Science 2023-08-11 Christian Bick , Elizabeth Gross , Heather A. Harrington , Michael T. Schaub

The logic of information flows (LIF) has recently been proposed as a general framework in the field of knowledge representation. In this framework, tasks of procedural nature can still be modeled in a declarative, logic-based fashion. In…

Logic in Computer Science · Computer Science 2024-08-07 Heba Aamer , Bart Bogaerts , Dimitri Surinx , Eugenia Ternovska , Jan Van den Bussche

Graphs have a superior ability to represent relational data, like chemical compounds, proteins, and social networks. Hence, graph-level learning, which takes a set of graphs as input, has been applied to many tasks including comparison,…

Machine Learning · Computer Science 2023-05-26 Zhenyu Yang , Ge Zhang , Jia Wu , Jian Yang , Quan Z. Sheng , Shan Xue , Chuan Zhou , Charu Aggarwal , Hao Peng , Wenbin Hu , Edwin Hancock , Pietro Liò

Graph transformations are a powerful computational model for manipulating complex networks, but handling temporal aspects and scalability remain significant challenges. We present a novel approach to implementing these transformations using…

Databases · Computer Science 2025-03-04 Evgeny Skvortsov , Yilin Xia , Bertram Ludäscher , Shawn Bowers

The use of knowledge graphs for grounding agents in real-world Q&A applications has become increasingly common. Answering complex queries often requires multi-hop reasoning and the ability to navigate vast relational structures. Standard…

Artificial Intelligence · Computer Science 2026-04-03 Taraneh Ghandi , Hamidreza Mahyar , Shachar Klaiman

Graph data is ubiquitous in the physical world, and it has always been a challenge to efficiently model graph structures using a unified paradigm for the understanding and reasoning on various graphs. Moreover, in the era of large language…

Artificial Intelligence · Computer Science 2023-12-19 Qihang Ai , Jianwu Zhou , Haiyun Jiang , Lemao Liu , Shuming Shi

Representing networks in a low dimensional latent space is a crucial task with many interesting applications in graph learning problems, such as link prediction and node classification. A widely applied network representation learning…

Machine Learning · Computer Science 2019-11-21 Abdulkadir Çelikkanat , Fragkiskos D. Malliaros

A foundation model like GPT elicits many emergent abilities, owing to the pre-training with broad inclusion of data and the use of the powerful Transformer architecture. While foundation models in natural languages are prevalent, can we…

Machine Learning · Computer Science 2025-06-18 Ziyuan Tang , Jie Chen

Logic languages based on the theory of rational, possibly infinite, trees have much appeal in that rational trees allow for faster unification (due to the safe omission of the occurs-check) and increased expressivity (cyclic terms can…

Programming Languages · Computer Science 2007-05-23 Roberto Bagnara , Roberta Gori , Patricia M. Hill , Enea Zaffanella

Multivariate graphs are prolific across many fields, including transportation and neuroscience. A key task in graph analysis is the exploration of connectivity, to, for example, analyze how signals flow through neurons, or to explore how…

Comparability graphs are the undirected graphs whose edges can be directed so that the resulting directed graph is transitive. They are related to posets and have applications in scheduling theory. This paper considers the problem of…

Data Structures and Algorithms · Computer Science 2015-03-11 Marc Tedder

Two-way regular path queries (2RPQs) have received increased attention recently due to their ability to relate pairs of objects by flexibly navigating graph-structured data. They are present in property paths in SPARQL 1.1, the new standard…

Logic in Computer Science · Computer Science 2014-03-05 Meghyn Bienvenu , Diego Calvanese , Magdalena Ortiz , Mantas Simkus

Graph clustering, which aims to divide nodes in the graph into several distinct clusters, is a fundamental yet challenging task. Benefiting from the powerful representation capability of deep learning, deep graph clustering methods have…

Machine Learning · Computer Science 2023-09-13 Yue Liu , Jun Xia , Sihang Zhou , Xihong Yang , Ke Liang , Chenchen Fan , Yan Zhuang , Stan Z. Li , Xinwang Liu , Kunlun He

We present results from numerical studies of supervised learning operations in recurrent networks considered as graphs, leading from a given set of input conditions to predetermined outputs. Graphs that have optimized their output for…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 H. Atmanspacher , T. Filk

The pursuit of automated scientific discovery has fueled progress from symbolic logic to modern AI, forging new frontiers in reasoning and pattern recognition. Transformers function as potential systems, where every possible relationship…

Artificial Intelligence · Computer Science 2025-01-15 Markus J. Buehler

There is a long line of research in the literature dedicated to word-representable graphs, which generalize several important classes of graphs. However, not much is known about word-representability of split graphs, another important class…

Combinatorics · Mathematics 2019-09-23 Herman Z. Q. Chen , Sergey Kitaev , Akira Saito

Researchers have relegated natural language processing tasks to Transformer-type models, particularly generative models, because these models exhibit high versatility when performing generation and classification tasks. As the size of these…

Computation and Language · Computer Science 2025-04-04 Fabio Yáñez-Romero , Andrés Montoyo , Armando Suárez , Yoan Gutiérrez , Ruslan Mitkov
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