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Mask-based pretraining has become a cornerstone of modern large-scale models across language, vision, and recently biology. Despite its empirical success, its role and limits in learning data representations have been unclear. In this work,…

Machine Learning · Computer Science 2025-09-29 Mingze Dong , Leda Wang , Yuval Kluger

Despite the impressive advances achieved using deep learning for functional brain activity analysis, the heterogeneity of functional patterns and the scarcity of imaging data still pose challenges in tasks such as identifying neurological…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Wenhui Cui , Haleh Akrami , Anand A. Joshi , Richard M. Leahy

To make sense of their surroundings, intelligent systems must transform complex sensory inputs to structured codes that are reduced to task-relevant information such as object category. Biological agents achieve this in a largely autonomous…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Robin Weiler , Matthias Brucklacher , Cyriel M. A. Pennartz , Sander M. Bohté

Human memory -- the learning of new information involves changes at the synaptic level between neurons dedicated for storage of in-formation. Generally, memory is classified as Long-Term Memory and Short-Term Memory. The various types of…

Neurons and Cognition · Quantitative Biology 2019-05-07 Qazi Emad-Ul-Haq , Muhammad Hussain , Hatim Aboalsamh , Saeed Bamatraf , Aamir Saeed Malik , Hafeez Ullah Amin

Aggregating multi-subject functional magnetic resonance imaging (fMRI) data is indispensable for generating valid and general inferences from patterns distributed across human brains. The disparities in anatomical structures and functional…

Machine Learning · Computer Science 2019-11-20 Weida Li , Mingxia Liu , Fang Chen , Daoqiang Zhang

The goal of universal audio representation learning is to obtain foundational models that can be used for a variety of downstream tasks involving speech, music and environmental sounds. To approach this problem, methods inspired by works on…

Sound · Computer Science 2024-05-22 Leonardo Pepino , Pablo Riera , Luciana Ferrer

Current RGB-D scene recognition approaches often train two standalone backbones for RGB and depth modalities with the same Places or ImageNet pre-training. However, the pre-trained depth network is still biased by RGB-based models which may…

Computer Vision and Pattern Recognition · Computer Science 2023-02-14 Jiange Yang , Sheng Guo , Gangshan Wu , Limin Wang

We present a novel masked image modeling (MIM) approach, context autoencoder (CAE), for self-supervised representation pretraining. We pretrain an encoder by making predictions in the encoded representation space. The pretraining tasks…

Computer Vision and Pattern Recognition · Computer Science 2023-08-11 Xiaokang Chen , Mingyu Ding , Xiaodi Wang , Ying Xin , Shentong Mo , Yunhao Wang , Shumin Han , Ping Luo , Gang Zeng , Jingdong Wang

Every day, the human brain processes an immense volume of visual information, relying on intricate neural mechanisms to perceive and interpret these stimuli. Recent breakthroughs in functional magnetic resonance imaging (fMRI) have enabled…

Computer Vision and Pattern Recognition · Computer Science 2023-05-22 Matteo Ferrante , Furkan Ozcelik , Tommaso Boccato , Rufin VanRullen , Nicola Toschi

Advances in data analysis and machine learning have revolutionized the study of brain signatures using fMRI, enabling non-invasive exploration of cognition and behavior through individual neural patterns. Functional connectivity (FC), which…

Image and Video Processing · Electrical Eng. & Systems 2025-10-31 Yashaswini , Sanjay Ghosh

Electroencephalogram (EEG)-based brain-computer interfaces (BCIs) are widely adopted due to their efficiency and portability; however, their decoding algorithms still face multiple challenges, including inadequate generalization,…

Human-Computer Interaction · Computer Science 2026-01-12 Tianwang Jia , Xiaoqing Chen , Dongrui Wu

Decoding visual-semantic information from brain signals, such as functional MRI (fMRI), across different subjects poses significant challenges, including low signal-to-noise ratio, limited data availability, and cross-subject variability.…

Computer Vision and Pattern Recognition · Computer Science 2024-09-27 Ruizhe Zheng , Lichao Sun

Smart systems that can accurately diagnose patients with mental disorders and identify effective treatments based on brain functional imaging data are of great applicability and are gaining much attention. Most previous machine learning…

Computer Vision and Pattern Recognition · Computer Science 2017-12-05 Jumana Dakka , Pouya Bashivan , Mina Gheiratmand , Irina Rish , Shantenu Jha , Russell Greiner

Graph masked autoencoders (GMAE) have emerged as a significant advancement in self-supervised pre-training for graph-structured data. Previous GMAE models primarily utilize a straightforward random masking strategy for nodes or edges during…

Machine Learning · Computer Science 2024-04-25 Chuang Liu , Yuyao Wang , Yibing Zhan , Xueqi Ma , Dapeng Tao , Jia Wu , Wenbin Hu

Self-supervised pre-training has been proved to be effective in learning transferable representations that benefit various visual tasks. This paper asks this question: can self-supervised pre-training learn general facial representations…

Computer Vision and Pattern Recognition · Computer Science 2024-03-05 Zheng Gao , Ioannis Patras

We propose the Neural Functional Alignment Space (NFAS), a brain-referenced representational framework for characterizing artificial neural networks on equal functional grounds. NFAS departs from conventional alignment approaches that rely…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Ruiyu Yan , Hanqi Jiang , Yi Pan , Xiaobo Li , Tianming Liu , Xi Jiang , Lin Zhao

Human computer interaction (HCI) involves a multidisciplinary fusion of technologies, through which the control of external devices could be achieved by monitoring physiological status of users. However, physiological biosignals often vary…

Signal Processing · Electrical Eng. & Systems 2020-09-29 Mo Han , Ozan Ozdenizci , Toshiaki Koike-Akino , Ye Wang , Deniz Erdogmus

Learning transferable representations from unlabeled time series is crucial for improving performance in data-scarce classification. Existing self-supervised methods often operate at the point level and rely on unidirectional encoding,…

Machine Learning · Computer Science 2026-03-02 Mingyue Cheng , Xiaoyu Tao , Zhiding Liu , Qi Liu , Hao Zhang , Rujiao Zhang , Enhong Chen

Brain networks in fMRI are typically identified using spatial independent component analysis (ICA), yet mathematical constraints such as sparse coding and positivity both provide alternate biologically-plausible frameworks for generating…

Neurons and Cognition · Quantitative Biology 2016-07-05 Jianwen Xie , Pamela K. Douglas , Ying Nian Wu , Arthur L. Brody , Ariana E. Anderson

Learning a robust Variational Autoencoder (VAE) is a fundamental step for many deep learning applications in medical image analysis, such as MRI synthesizes. Existing brain VAEs predominantly focus on single-modality data (i.e., T1-weighted…

Computer Vision and Pattern Recognition · Computer Science 2026-04-08 Mingjie Li , Edward Kim , Yue Zhao , Ehsan Adeli , Kilian M. Pohl
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