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Machine learning models for repeated measurements are limited. Using topological data analysis (TDA), we present a classifier for repeated measurements which samples from the data space and builds a network graph based on the data topology.…

Machine Learning · Computer Science 2019-04-08 Henri Riihimäki , Wojciech Chachólski , Jakob Theorell , Jan Hillert , Ryan Ramanujam

We introduce a very general approach to the analysis of signals from their noisy measurements from the perspective of Topological Data Analysis (TDA). While TDA has emerged as a powerful analytical tool for data with pronounced topological…

Signal Processing · Electrical Eng. & Systems 2025-07-29 Juan Manuel Miramont , Kin Aun Tan , Soumendu Sundar Mukherjee , Rémi Bardenet , Subhroshekhar Ghosh

Identifying molecular signatures from complex disease patients with underlying symptomatic similarities is a significant challenge in the analysis of high dimensional multi-omics data. Topological data analysis (TDA) provides a way of…

Genomics · Quantitative Biology 2024-04-23 Davide Gurnari , Aldo Guzmán-Sáenz , Filippo Utro , Aritra Bose , Saugata Basu , Laxmi Parida

Deep topological data analysis (TDA) offers a principled framework for capturing structural invariants such as connectivity and cycles that persist across scales, making it a natural fit for anomaly segmentation (AS). Unlike thresholdbased…

Computer Vision and Pattern Recognition · Computer Science 2026-01-29 Ali Zia , Usman Ali , Umer Ramzan , Abdul Rehman , Abdelwahed Khamis , Wei Xiang

We introduce the first unified theory for target tracking using Multiple Hypothesis Tracking, Topological Data Analysis, and machine learning. Our string of innovations are 1) robust topological features are used to encode behavioral…

The discovery of spatio-temporal dependencies within urban road networks that cause Recurrent Congestion (RC) patterns is crucial for numerous real-world applications, including urban planning and scheduling of public transportation…

Machine Learning · Computer Science 2021-07-21 Nicolas Tempelmeier , Udo Feuerhake , Oskar Wage , Elena Demidova

Most existing literature focuses on the exterior temporal rhythm of human movement to infer the functional regions in a city, but they neglects the underlying interdependence between the functional regions and human activities which…

Social and Information Networks · Computer Science 2015-01-22 Ye Zhi , Yu Liu , Shaowen Wang , Min Deng , Jing Gao , Haifeng Li

There are different functional regions in cities such as tourist attractions, shopping centers, workplaces and residential places. The human mobility patterns for different functional regions are different, e.g., people usually go to work…

Social and Information Networks · Computer Science 2016-11-15 Kai Zhao , C Mohan Prasath , Sasu Tarkoma

We apply topological data analysis to the behavior of C. elegans, a widely-studied model organism in biology. In particular, we use topology to produce a quantitative summary of complex behavior which may be applied to high-throughput data.…

Algebraic Topology · Mathematics 2021-07-23 Ashleigh Thomas , Kathleen Bates , Alex Elchesen , Iryna Hartsock , Hang Lu , Peter Bubenik

Traffic prediction is one of the key elements to ensure the safety and convenience of citizens. Existing traffic prediction models primarily focus on deep learning architectures to capture spatial and temporal correlation. They often…

Machine Learning · Computer Science 2023-08-22 Sumin Han , Youngjun Park , Minji Lee , Jisun An , Dongman Lee

Autism Spectrum Disorder (ASD) is a prevalent neurological disorder. However, the multi-faceted symptoms and large individual differences among ASD patients are hindering the diagnosis process, which largely relies on subject descriptions…

Neurons and Cognition · Quantitative Biology 2024-11-11 Yuzhe Chen , Dayu Qin , Ercan Engin Kuruoglu

Topological Data Analysis (TDA), an emerging field in investment sciences, harnesses mathematical methods to extract data features based on shape, offering a promising alternative to classical portfolio selection methodologies. We utilize…

Portfolio Management · Quantitative Finance 2026-01-08 Anubha Goel , Amita Sharma , Juho Kanniainen

The increased availability of large-scale trajectory data around the world provides rich information for the study of urban dynamics. For example, New York City Taxi Limousine Commission regularly releases source-destination information…

Machine Learning · Computer Science 2015-12-31 Hongjian Wang , Zhenhui Li , Yu-Hsuan Kuo , Dan Kifer

Navigating mobile robots in social environments remains a challenging task due to the intricacies of human-robot interactions. Most of the motion planners designed for crowded and dynamic environments focus on choosing the best velocity to…

Topological data analysis (TDA) detects geometric structure in biological data. However, many TDA algorithms are memory intensive and impractical for massive datasets. Here, we introduce a statistical protocol that reduces TDA's memory…

Quantitative Methods · Quantitative Biology 2025-09-05 Andrew J. Stier , Naichen Shi , Raed Al Kontar , Chad Giusti , Marc G. Berman

Technology development produces terabytes of data generated by hu- man activity in space and time. This enormous amount of data often called big data becomes crucial for delivering new insights to decision makers. It contains behavioral…

Social and Information Networks · Computer Science 2015-06-12 Zolzaya Dashdorj , Stanislav Sobolevsky

Time-Spatial data plays a crucial role for different fields such as traffic management. These data can be collected via devices such as surveillance sensors or tracking systems. However, how to efficiently an- alyze and visualize these data…

Computer Vision and Pattern Recognition · Computer Science 2017-07-11 Zhenghao Chen , Jianlong Zhou , Xiuying Wang

We present a novel topological framework for analyzing functional brain signals using time-frequency analysis. By integrating persistent homology with time-frequency representations, we capture multi-scale topological features that…

Neurons and Cognition · Quantitative Biology 2025-04-23 Moo K. Chung , Aaron F. Struck

Understanding the variability of people's travel patterns is key to transport planning and policy-making. However, to what extent daily transit use displays geographic and temporal variabilities, and what are the contributing factors have…

Computers and Society · Computer Science 2024-03-12 Sui Tao , Francisco Rowe , Hongyu Shan

In this paper, we present a three-step methodological framework, including location identification, bias modification, and out-of-sample validation, so as to promote human mobility analysis with social media data. More specifically, we…

Social and Information Networks · Computer Science 2018-08-15 Yilan Cui , Xing Xie , Yi Liu
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