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In this report, we present TAGLAS, an atlas of text-attributed graph (TAG) datasets and benchmarks. TAGs are graphs with node and edge features represented in text, which have recently gained wide applicability in training graph-language or…

Machine Learning · Computer Science 2024-10-22 Jiarui Feng , Hao Liu , Lecheng Kong , Mingfang Zhu , Yixin Chen , Muhan Zhang

We introduce an intuitive algorithmic methodology for enacting automated rewriting of string diagrams within a general double-pushout (DPO) framework, in which the sequence of rewrites is chosen in accordance with the causal structure of…

Logic in Computer Science · Computer Science 2021-05-11 Jonathan Gorard , Manojna Namuduri , Xerxes D. Arsiwalla

We study cut algebras which are toric rings associated to graphs. The key idea is to consider suitable retracts to understand algebraic properties and invariants of such algebras like being a complete intersection, having a linear…

Commutative Algebra · Mathematics 2021-05-18 Tim Roemer , Sara Saeedi Madani

It is challenging for generative models to learn a distribution over graphs because of the lack of permutation invariance: nodes may be ordered arbitrarily across graphs, and standard graph alignment is combinatorial and notoriously…

Social and Information Networks · Computer Science 2023-01-27 Kimia Shayestehfard , Dana Brooks , Stratis Ioannidis

We address the problem of cyclic termgraph rewriting. We propose a new framework where rewrite rules are tuples of the form $(L,R,\tau,\sigma)$ such that $L$ and $R$ are termgraphs representing the left-hand and the right-hand sides of the…

Logic in Computer Science · Computer Science 2008-11-21 Dominique Duval , Rachid Echahed , Frédéric Prost

deepstruct connects deep learning models and graph theory such that different graph structures can be imposed on neural networks or graph structures can be extracted from trained neural network models. For this, deepstruct provides deep…

Machine Learning · Computer Science 2021-12-15 Julian Stier , Michael Granitzer

Graph rewrite formalisms are a powerful approach to modeling complex molecular systems. They capture the intrinsic concurrency of molecular interactions, thereby enabling a formal notion of mechanism (a partially ordered set of events) that…

Logic in Computer Science · Computer Science 2019-01-04 Ioana Cristescu , Walter Fontana , Jean Krivine

Higher-order pushdown systems and ground tree rewriting systems can be seen as extensions of suffix word rewriting systems. Both classes generate infinite graphs with interesting logical properties. Indeed, the model-checking problem for…

Formal Languages and Automata Theory · Computer Science 2015-02-17 Vincent Penelle

Graph neural networks (GNNs) have limited expressive power, failing to represent many graph classes correctly. While more expressive graph representation learning (GRL) alternatives can distinguish some of these classes, they are…

Machine Learning · Computer Science 2021-12-08 Leonardo Cotta , Christopher Morris , Bruno Ribeiro

We introduce techniques for proving uniform termination of graph transformation systems, based on matrix interpretations for string rewriting. We generalize this technique by adapting it to graph rewriting instead of string rewriting and by…

Logic in Computer Science · Computer Science 2023-10-12 H. J. Sander Bruggink , Barbara König , Dennis Nolte , Hans Zantema

In the talk at the workshop my aim was to demonstrate the usefulness of graph techniques for tackling problems that have been studied predominantly as problems on the term level: increasing sharing in functional programs, and addressing…

Logic in Computer Science · Computer Science 2019-02-07 Clemens Grabmayer

We propose a new approach to text semantic analysis and general corpus analysis using, as termed in this article, a "bi-gram graph" representation of a corpus. The different attributes derived from graph theory are measured and analyzed as…

Machine Learning · Computer Science 2021-07-30 Thomas Konstantinovsky , Matan Mizrachi

The processes of constructing some graphs from others using binary operations of union with intersection (gluing) are studied. For graph classes closed with respect to gluing operations the elemental and operational bases are introduced.…

Combinatorics · Mathematics 2020-11-24 M. A. Iordanski

Lots of neural network architectures have been proposed to deal with learning tasks on graph-structured data. However, most of these models concentrate on only node features during the learning process. The edge features, which usually play…

Machine Learning · Computer Science 2021-01-20 Jun Chen , Haopeng Chen

Naive Retrieval-Augmented Generation (RAG) focuses on individual documents during retrieval and, as a result, falls short in handling networked documents which are very popular in many applications such as citation graphs, social media, and…

Machine Learning · Computer Science 2025-07-15 Yuntong Hu , Zhihan Lei , Zheng Zhang , Bo Pan , Chen Ling , Liang Zhao

In this paper, we construct directed strongly regular graphs and divisible design graphs with new parameters merging some basic relations of so-called Tatra associations schemes. We also study the above association schemes, their fusions…

Combinatorics · Mathematics 2026-01-19 Mikhail Muzychuk , Grigory Ryabov

The presented work focuses on problems from determinant theory, set theory and topology. The term graph is the binding element that connects these problems. Graphs are distinguished by their geometrical simplicity, which helps in showing…

History and Overview · Mathematics 2024-12-24 Ágnes Cseh

Augmented graphs play a vital role in regularizing Graph Neural Networks (GNNs), which leverage information exchange along edges in graphs, in the form of message passing, for learning. Due to their effectiveness, simple edge and node…

Machine Learning · Computer Science 2022-09-07 Hongyu Guo , Sun Sun

Current state-of-the-art large language models are effective in generating high-quality text and encapsulating a broad spectrum of world knowledge. These models, however, often hallucinate and lack locally relevant factual data.…

Software Engineering · Computer Science 2024-02-21 Anton Shapkin , Denis Litvinov , Yaroslav Zharov , Egor Bogomolov , Timur Galimzyanov , Timofey Bryksin

In this manuscript we study braid varieties, a class of affine algebraic varieties associated to positive braids. Several geometric constructions are presented, including certain torus actions on braid varieties and holomorphic symplectic…

Representation Theory · Mathematics 2024-08-12 Roger Casals , Eugene Gorsky , Mikhail Gorsky , José Simental