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A significant part of the thin layers of counter-ions adjacent to the exterior and interior surfaces of a cell membrane form quasi-two-dimensional (2D) layers of mobile charge. Collective charge density oscillations, known as plasmon modes,…

Subcellular Processes · Quantitative Biology 2009-11-10 Efstratios Manousakis

We present a new multiphase-field theory for describing pattern formation in multi-domain and/or multi-component systems. The construction of the free energy functional and the dynamic equations is based on criteria that ensure mathematical…

Materials Science · Physics 2015-12-09 Gyula I. Toth , Tamas Pusztai , Laszlo Granasy

The paper addresses a two-temperature model for simulating compressible two-phase flow taking into account diffusion processes related to the heat conduction and viscosity of the phases. This model is reduced from the two-phase…

Numerical Analysis · Mathematics 2022-07-27 Chao Zhang , Igor Menshov , Lifeng Wang , Zhijun Shen

We study the mass-conserved reaction-diffusion system known as the wave-pinning model, which serves as a minimal framework for describing cell polarity. In this model, the interplay between reaction kinetics and slow diffusion forms a sharp…

Dynamical Systems · Mathematics 2026-01-09 Shunsuke Kobayashi , Koya Sakakibara , Taikei Uechi

The ground state of spin-$1\over 2$ fermions with contact $s$-wave inter- and $p$-wave intra-species interactions is discussed. Particularly, we formulate the mean field scheme for calculating thermodynamic properties of the system in…

Quantum Gases · Physics 2023-03-17 A. Nikolaeva , O. Hryhorchak , V. Pastukhov

Phase field modelling offers an extremely general framework to predict microstructural evolutions in complex systems. However, its computational implementation requires a discretisation scheme with a grid spacing small enough to preserve…

Computational Physics · Physics 2018-07-18 Alphonse Finel , Yann Le Bouar , Benoît Dabas , Benoît Appolaire

Interfaces between lamellar and disordered phases, and grain boundaries within lamellar phases, are investigated employing a simple Landau free energy functional. The former are examined using analytic, approximate methods in the weak…

Soft Condensed Matter · Physics 2015-06-25 Simon Villain-Guillot , Roland R. Netz , David Andelman , Michael Schick

The paper is devoted to two-phase flow simulations and investigates the ability of a diffusive interface Cahn-Hilliard Volume-of-Fluid model to capture the dynamics of the air-sea interface at geophysically relevant Reynolds numbers. It…

Dielectric interfaces are crucial to the behavior of charged membranes, from graphene to synthetic and biological lipid bilayers. Understanding electrolyte behavior near these interfaces remains a challenge, especially in the case of rough…

Soft Condensed Matter · Physics 2024-04-03 Nicholas Pogharian , Alexandre P. dos Santos , Ali Ehlen , Monica Olvera de la Cruz

The propagation and roughening of a fluid-gas interface through a disordered medium in the case of capillary driven spontaneous imbibition is considered. The system is described by a conserved (model B) phase-field model, with the structure…

Disordered Systems and Neural Networks · Physics 2009-10-31 M. Dube , M. Rost , K. R. Elder , M. Alava , S. Majaniemi , T. Ala-Nissila

Many physical systems of interest involve the close interaction of a flow in a domain with complex, time-varying boundaries. Treatment of boundaries of this nature is cumbersome due to the difficulty in explicitly tracking boundaries that…

Fluid Dynamics · Physics 2025-02-25 Emma M. Boyd , Eric Sandall , Maycon Meier , J. Matt Quinlan , Brandon Runnels

This chapter summarizes several approaches combining theory, simulation and experiment that aim for a better understanding of phenomena in lipid bilayers and membrane protein systems, covering topics such as lipid rafts, membrane mediated…

Biological Physics · Physics 2014-12-17 Markus Deserno , Kurt Kremer , Harald Paulsen , Christine Peter , Friederike Schmid

The classical phase-field modeling approaches for multiphase problems represent each phase using a regularized characteristic function, which necessarily introduces a simplex constraint for the phase-field variables. Additionally, the…

Numerical Analysis · Mathematics 2025-11-11 Lun Zhang , Chenxi Wang , Nan Lu , Zhen Zhang

The conversion of phase variations in an optical wavefield into intensity information is of fundamental importance for optical imaging technology including microscopy of biological cells. While conventional approaches to phase-imaging…

Optics · Physics 2022-09-07 Lukas Wesemann , Jon Rickett , Timothy J. Davis , Ann Roberts

The statistical mechanics of flexible two-dimensional surfaces (membranes) appears in a wide variety of physical settings. In this talk we discuss the simplest case of fixed-connectivity surfaces. We first review the current theoretical…

High Energy Physics - Lattice · Physics 2009-10-28 M. J. Bowick , S. Catterall , M. Falcioni , G. Thorleifsson , K. Anagnostopoulos

We use extensive first principle simulations to show the major role played by interfaces in the mechanism of phase separation observed in semiconductor multifunctional materials. We make an analogy with the precipitation sequence observed…

A bio tissue model consisting of multilayer spherical cells including four nested radial domains (nucleus, nuclear membrane, cytoplasm and plasma membrane) is worked out to derive the cell heating dynamics in presence of membrane…

Biological Physics · Physics 2015-01-27 V. Pierro , A. De Vita , R. P. Croce , I. M. Pinto

We construct a phase field model including hydrodynamics and elasticity in one-component systems. It can be used to investigate solid-liquid and liquid-liquid phase transitions. Upon first-order phase transition, a velocity field is induced…

Soft Condensed Matter · Physics 2015-03-13 Kyohei Takae , Akira Onuki

The unbinding properties of an interface near structured wedges are investigated by discrete models with short range interactions. The calculations demonstrate that interface unbinding take place in two stages: $i$) a continuous…

Statistical Mechanics · Physics 2009-11-11 Gilberto Giugliarelli

Diffusion of particles through an heterogenous obstacle line is modeled as a two-dimensional diffusion problem with a one--directional nonlinear convective drift and is examined using two-scale asymptotic analysis. At the scale where the…

Analysis of PDEs · Mathematics 2018-04-24 Emilio N. M. Cirillo , Ida de Bonis , Adrian Muntean , Omar Richardson
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