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The explosion of data on animal behavior in more natural contexts highlights the fact that these behaviors exhibit correlations across many time scales. But there are major challenges in analyzing these data: records of behavior in single…

Neurons and Cognition · Quantitative Biology 2024-01-23 William Bialek , Joshua W. Shaevitz

A central task in the analysis of human movement behavior is to determine systematic patterns and differences across experimental conditions, participants and repetitions. This is possible because human movement is highly regular, being…

Applications · Statistics 2023-01-23 Lars Lau Raket , Britta Grimme , Gregor Schöner , Christian Igel , Bo Markussen

In this paper, we provide a multiscale perspective on the problem of maximum marginal likelihood estimation. We consider and analyse a diffusion-based maximum marginal likelihood estimation scheme using ideas from multiscale dynamics. Our…

Computation · Statistics 2024-06-11 O. Deniz Akyildiz , Michela Ottobre , Iain Souttar

Species distribution models (SDMs) aim to predict the distribution of species by relating occurrence data with environmental variables. Recent applications of deep learning to SDMs have enabled new avenues, specifically the inclusion of…

Machine Learning · Computer Science 2024-11-07 Nina van Tiel , Robin Zbinden , Emanuele Dalsasso , Benjamin Kellenberger , Loïc Pellissier , Devis Tuia

1. Complex systems of moving and interacting objects are ubiquitous in the natural and social sciences. Predicting their behavior often requires models that mimic these systems with sufficient accuracy, while accounting for their inherent…

Quantitative Methods · Quantitative Biology 2014-12-02 Jonathan R. Potts , Marie Auger-Méthé , Karl Mokross , Mark A. Lewis

The analysis of telemetry data is common in animal ecological studies. While the collection of telemetry data for individual animals has improved dramatically, the methods to properly account for inherent uncertainties (e.g., measurement…

Methodology · Statistics 2017-07-14 Henry R. Scharf , Mevin B. Hooten , Devin S. Johnson

The performance of tracking algorithms strongly depends on the chosen model assumptions regarding the target dynamics. If there is a strong mismatch between the chosen model and the true object motion, the track quality may be poor or the…

Machine Learning · Statistics 2024-10-15 Isabel Schlangen , André Brandenburger , Mengwei Sun , James R. Hopgood

Active sensing is traditionally defined as the expenditure of energy, typically in the form of movement, for obtaining information. Here, we propose that the combination of reliance on adaptive sensors, the linkage between movement and…

Neurons and Cognition · Quantitative Biology 2026-05-25 Andrew Lamperski , Debojyoti Biswas , Eric S. Fortune , John Guckenheimer , Kathleen Hoffman , Noah J. Cowan

Animal movement exhibits complex behavior which can be influenced by unobserved environmental conditions. We propose a model which allows for a spatially-varying movement rate and spatially-varying drift through a semiparametric potential…

Applications · Statistics 2017-02-28 James C. Russell , Ephraim M. Hanks , Murali Haran , David P. Hughes

In empirical studies of random walks, continuous trajectories of animals or individuals are usually sampled over a finite number of points in space and time. It is however unclear how this partial observation affects the measured…

Physics and Society · Physics 2018-03-13 Riccardo Gallotti , Rémi Louf , Jean-Marc Luck , Marc Barthelemy

We introduce a scheme for deriving an optimally-parametrised Langevin dynamics of few collective variables from data generated in molecular dynamics simulations. The drift and the position-dependent diffusion profiles governing the Langevin…

Statistical Mechanics · Physics 2008-08-22 Cristian Micheletti , Giovanni Bussi , Alessandro Laio

In this paper, we propose a general hidden state random walk model to describe the movement of an animal that takes into account movement taxis with respect to features of the environment. A circular-linear process models the direction and…

Methodology · Statistics 2016-10-05 Aurélien Nicosia , Thierry Duchesne , Louis-Paul Rivest , Daniel Fortin

We propose a (time) multiscale method for the coarse-grained analysis of self--propelled particle models of swarms comprising a mixture of `na\"{i}ve' and `informed' individuals, used to address questions related to collective motion and…

Populations and Evolution · Quantitative Biology 2012-02-28 Michael Raghib , Simon A. Levin , Ioannis G. Kevrekidis

The knowledge of the movement of animals is important and necessary for ecologists to do further analysis such as exploring the animal migration route. A novel method which is based on the state space modeling has been proposed to track the…

Signal Processing · Electrical Eng. & Systems 2018-10-17 Hua Bai

We record and analyze the movement patterns of the marsupial {\it Didelphis aurita} at different temporal scales. Animals trajectories are collected at a daily scale by using spool-and-line techniques, and with the help of radio-tracking…

Quantitative Methods · Quantitative Biology 2025-01-24 E. Brigatti , B. Ríos-Uzeda , M. V. Vieira

1. Animal movement patterns contribute to our understanding of variation in breeding success and survival of individuals, and the implications for population dynamics. 2. Over time, sensor technology for measuring movement patterns has…

Quantitative Methods · Quantitative Biology 2018-01-11 Leah R. Johnson , Philipp H. Boersch-Supan , Richard A. Phillips , Sadie J. Ryan

In this study, we analyse a high-frequency movement dataset for a group of grazing cattle and investigate their spatiotemporal patterns using a simple two-state `stop-and-move' mobility model. We find that the dispersal kernel in the moving…

Quantitative Methods · Quantitative Biology 2016-03-18 Kun Zhao , Raja Jurdak

L\'{e}vy walk is a popular and more `physical' model to describe the phenomena of superdiffusion, because of its finite velocity. The movements of particles are under the influences of external potentials almost at anytime and anywhere. In…

Statistical Mechanics · Physics 2021-02-03 Yao Chen , Weihua Deng

1. Advances in tracking technology have led to an exponential increase in animal location data, greatly enhancing our ability to address interesting questions in movement ecology, but also presenting new challenges related to data manage-…

Quantitative Methods · Quantitative Biology 2018-05-10 Johannes Signer , John Fieberg , Tal Avgar

Anomalous diffusion phenomena have been observed in many complex physical and biological systems. One significant advance recently is the physical extension of particle's motion in static medium to uniformly (and even nonuniformly)…

Statistical Mechanics · Physics 2023-03-28 Xudong Wang , Yao Chen , Wanli Wang
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