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Graph Neural Networks (GNNs) are widely used to compute representations of node pairs for downstream tasks such as link prediction. Yet, theoretical understanding of their expressive power has focused almost entirely on graph-level…

Machine Learning · Computer Science 2025-07-01 Veronica Lachi , Francesco Ferrini , Antonio Longa , Bruno Lepri , Andrea Passerini , Manfred Jaeger

Graph autoencoders (GAEs) are powerful tools in representation learning for graph embedding. However, the performance of GAEs is very dependent on the quality of the graph structure, i.e., of the adjacency matrix. In other words, GAEs would…

Machine Learning · Computer Science 2021-03-24 Rui Zhang , Yunxing Zhang , Xuelong Li

For graph classification tasks, many traditional kernel methods focus on measuring the similarity between graphs. These methods have achieved great success on resolving graph isomorphism problems. However, in some classification problems,…

Machine Learning · Computer Science 2021-02-18 Jianming Huang , Hiroyuki Kasai

The expressive power of Graph Neural Networks (GNNs) is often analysed via correspondence to the Weisfeiler-Leman (WL) algorithm and fragments of first-order logic. Standard GNNs are limited to performing aggregation over immediate…

Machine Learning · Computer Science 2026-02-23 Huan Luo , Jonni Virtema

Unsupervised plain graph alignment (UPGA) aims to align corresponding nodes across two graphs without any auxiliary information. Existing UPGA methods rely on structural consistency while neglecting the inherent structural differences in…

Social and Information Networks · Computer Science 2025-06-24 Boyan Wang , Weijie Feng , Jinyang Huang , Dan Guo , Zhi Liu

Implicit models, an emerging model class, compute outputs by iterating a single parameter block to a fixed point. This architecture realizes an infinite-depth, weight-tied network that trains with constant memory, significantly reducing…

Machine Learning · Computer Science 2026-04-01 Jialin Liu , Lisang Ding , Stanley Osher , Wotao Yin

Pretrained (language) embeddings are versatile, task-agnostic feature representations of entities, like words, that are central to many machine learning applications. These representations can be enriched through retrofitting, a class of…

Machine Learning · Computer Science 2020-10-13 Justin Dieter , Arun Tejasvi Chaganty

In this paper, we study the problem of unsupervised graph representation learning by harnessing the control properties of dynamical networks defined on graphs. Our approach introduces a novel framework for contrastive learning, a widely…

Machine Learning · Computer Science 2024-04-19 Obaid Ullah Ahmad , Anwar Said , Mudassir Shabbir , Waseem Abbas , Xenofon Koutsoukos

While Graph Neural Networks (GNNs) have achieved remarkable results in a variety of applications, recent studies exposed important shortcomings in their ability to capture the structure of the underlying graph. It has been shown that the…

Machine Learning · Computer Science 2023-09-26 Giorgos Bouritsas , Fabrizio Frasca , Stefanos Zafeiriou , Michael M. Bronstein

Multimodal representation learning is fundamentally about transforming incomparable modalities into comparable representations. While prior research primarily focused on explicitly aligning these representations through targeted learning…

Machine Learning · Computer Science 2025-06-16 Megan Tjandrasuwita , Chanakya Ekbote , Liu Ziyin , Paul Pu Liang

Counterfactual explanations have emerged as a powerful tool to unveil the opaque decision-making processes of graph neural networks (GNNs). However, existing techniques primarily focus on edge modifications, often overlooking the crucial…

Machine Learning · Computer Science 2025-02-17 Flavio Giorgi , Fabrizio Silvestri , Gabriele Tolomei

Recently, contrastive learning (CL) has emerged as a successful method for unsupervised graph representation learning. Most graph CL methods first perform stochastic augmentation on the input graph to obtain two graph views and maximize the…

Machine Learning · Computer Science 2021-03-01 Yanqiao Zhu , Yichen Xu , Feng Yu , Qiang Liu , Shu Wu , Liang Wang

Node similarity scores are a foundation for machine learning in graphs for clustering, node classification, anomaly detection, and link prediction with applications in biological systems, information networks, and recommender systems.…

Social and Information Networks · Computer Science 2023-01-30 Christopher Blöcker , Jelena Smiljanić , Ingo Scholtes , Martin Rosvall

Applying machine learning to molecules is challenging because of their natural representation as graphs rather than vectors.Several architectures have been recently proposed for deep learning from molecular graphs, but they suffer from…

Machine Learning · Statistics 2020-09-15 Jaak Simm , Adam Arany , Edward De Brouwer , Yves Moreau

The task of entity alignment between knowledge graphs (KGs) aims to identify every pair of entities from two different KGs that represent the same entity. Many machine learning-based methods have been proposed for this task. However, to our…

Information Retrieval · Computer Science 2023-11-14 Rui Zhang , Yixin Su , Bayu Distiawan Trisedya , Xiaoyan Zhao , Min Yang , Hong Cheng , Jianzhong Qi

Due to the ubiquitous use of embeddings as input representations for a wide range of natural language tasks, imputation of embeddings for rare and unseen words is a critical problem in language processing. Embedding imputation involves…

Computation and Language · Computer Science 2020-06-09 Ziyi Yang , Chenguang Zhu , Vin Sachidananda , Eric Darve

We consider the problem of learning a graph from a finite set of noisy graph signal observations, the goal of which is to find a smooth representation of the graph signal. Such a problem is motivated by the desire to infer relational…

Machine Learning · Computer Science 2023-02-08 Xiaolu Wang , Yuen-Man Pun , Anthony Man-Cho So

Research on the theoretical expressiveness of Graph Neural Networks (GNNs) has developed rapidly, and many methods have been proposed to enhance the expressiveness. However, most methods do not have a uniform expressiveness measure except…

Machine Learning · Computer Science 2024-06-04 Yanbo Wang , Muhan Zhang

With the rapid development of text-to-image generation technology, accurately assessing the alignment between generated images and text prompts has become a critical challenge. Existing methods rely on Euclidean space metrics, neglecting…

Computer Vision and Pattern Recognition · Computer Science 2026-03-20 Wenzhi Chen , Bo Hu , Leida Li , Lihuo He , Wen Lu , Xinbo Gao

The computation of distance measures between nodes in graphs is inefficient and does not scale to large graphs. We explore dense vector representations as an effective way to approximate the same information: we introduce a simple yet…

Computation and Language · Computer Science 2019-06-18 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko
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