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One of the most important concepts in biological network analysis is that of network motifs, which are patterns of interconnections that occur in a given network at a frequency higher than expected in a random network. In this work we are…

Discrete Mathematics · Computer Science 2020-05-29 Diego P Rubert , Eloi Araujo , Marco A Stefanes , Jens Stoye , Fábio V Martinez

The problem of finding dense components of a graph is a widely explored area in data analysis, with diverse applications in fields and branches of study including community mining, spam detection, computer security and bioinformatics. This…

Information Retrieval · Computer Science 2021-03-02 B. D. M. De Zoysa , Y. A. M. M. A. Ali , M. D. I. Maduranga , Indika Perera , Saliya Ekanayake , Anil Vullikanti

Finding dense bipartite subgraphs and detecting the relations among them is an important problem for affiliation networks that arise in a range of domains, such as social network analysis, word-document clustering, the science of science,…

Social and Information Networks · Computer Science 2017-11-29 A. Erdem Sariyuce , Ali Pinar

A popular approach to model interactions is to represent them as a network with nodes being the agents and the interactions being the edges. Interactions are often timestamped, which leads to having timestamped edges. Many real-world…

Social and Information Networks · Computer Science 2023-08-30 Chamalee Wickrama Arachchi , Nikolaj Tatti

This paper looks at the task of network topology inference, where the goal is to learn an unknown graph from nodal observations. One of the novelties of the approach put forth is the consideration of prior information about the density of…

Signal Processing · Electrical Eng. & Systems 2022-07-12 Samuel Rey , T. Mitchell Roddenberry , Santiago Segarra , Antonio G. Marques

We consider the explanation problem of Graph Neural Networks (GNNs). Most existing GNN explanation methods identify the most important edges or nodes but fail to consider substructures, which are more important for graph data. The only…

Machine Learning · Computer Science 2023-02-28 Zhaoning Yu , Hongyang Gao

Complex networks are a powerful paradigm to model complex systems. Specific network models, e.g., multilayer networks, temporal networks, and signed networks, enrich the standard network representation with additional information to better…

Data Structures and Algorithms · Computer Science 2019-06-05 Edoardo Galimberti

We present a principled approach for detecting overlapping temporal community structure in dynamic networks. Our method is based on the following framework: find the overlapping temporal community structure that maximizes a quality function…

Social and Information Networks · Computer Science 2013-03-29 Yudong Chen , Vikas Kawadia , Rahul Urgaonkar

Many real-world systems can be expressed in temporal networks with nodes playing far different roles in structure and function and edges representing the relationships between nodes. Identifying critical nodes can help us control the spread…

Social and Information Networks · Computer Science 2021-07-07 En-Yu Yu , Yan Fu , Jun-Lin Zhou , Hong-Liang Sun , Duan-Bing Chen

Temporal networks are commonly used to represent systems where connections between elements are active only for restricted periods of time, such as networks of telecommunication, neural signal processing, biochemical reactions and human…

Data Analysis, Statistics and Probability · Physics 2011-11-15 Lauri Kovanen , Márton Karsai , Kimmo Kaski , János Kertész , Jari Saramäki

Dense subgraph discovery is a fundamental problem in graph mining with a wide range of applications \cite{gionis2015dense}. Despite a large number of applications ranging from computational neuroscience to social network analysis, that take…

Social and Information Networks · Computer Science 2021-12-08 Tianyi Chen , Francesco Bonchi , David Garcia-Soriano , Atsushi Miyauchi , Charalampos E. Tsourakakis

Finding dense subgraphs of a large network is a fundamental problem in graph mining that has been studied extensively both for its theoretical richness and its many practical applications over the last five decades. However, most existing…

Social and Information Networks · Computer Science 2023-10-10 Ali Behrouz , Farnoosh Hashemi

Many real world networks contain a statistically surprising number of certain subgraphs, called network motifs. In the prevalent approach to motif analysis, network motifs are detected by comparing subgraph frequencies in the original…

Social and Information Networks · Computer Science 2014-11-25 Anatol E. Wegner

Real-time analysis of graphs containing temporal information, such as social media streams, Q&A networks, and cyber data sources, plays an important role in various applications. Among them, detecting patterns is one of the fundamental…

Databases · Computer Science 2023-12-19 Seunghwan Min , Jihoon Jang , Kunsoo Park , Dora Giammarresi , Giuseppe F. Italiano , Wook-Shin Han

Key graph-based problems play a central role in understanding network topology and uncovering patterns of similarity in homogeneous and temporal data. Such patterns can be revealed by analyzing communities formed by nodes, which in turn can…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-02 Davide Rucci , Emanuele Carlini , Patrizio Dazzi , Hanna Kavalionak , Matteo Mordacchini

The planted densest subgraph detection problem refers to the task of testing whether in a given (random) graph there is a subgraph that is unusually dense. Specifically, we observe an undirected and unweighted graph on $n$ vertices. Under…

Data Structures and Algorithms · Computer Science 2024-05-06 Wasim Huleihel , Arya Mazumdar , Soumyabrata Pal

Counting the number of small subgraphs, called motifs, is a fundamental problem in social network analysis and graph mining. Many real-world networks are directed and temporal, where edges have timestamps. Motif counting in directed,…

Social and Information Networks · Computer Science 2026-02-03 Yunjie Pan , Omkar Bhalerao , C. Seshadhri , Nishil Talati

Temporal networks are an important type of network whose topological structure changes over time. Compared with methods on static networks, temporal network embedding (TNE) methods are facing three challenges: 1) it cannot describe the…

Social and Information Networks · Computer Science 2022-12-14 Shanfan Zhang , Zhan Bu

In temporal ordered clustering, given a single snapshot of a dynamic network in which nodes arrive at distinct time instants, we aim at partitioning its nodes into $K$ ordered clusters $\mathcal{C}_1 \prec \cdots \prec \mathcal{C}_K$ such…

Social and Information Networks · Computer Science 2020-08-10 Krzysztof Turowski , Jithin K. Sreedharan , Wojciech Szpankowski

Robustness is a critical measure of the resilience of large networked systems, such as transportation and communication networks. Most prior works focus on the global robustness of a given graph at large, e.g., by measuring its overall…

Social and Information Networks · Computer Science 2015-01-09 Hau Chan , Shuchu Han , Leman Akoglu
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