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We present MadAnalysis 5, an analysis package dedicated to phenomenological studies of simulated collisions occurring in high-energy physics experiments. Within this framework, users are invited, through a user-friendly Python interpreter,…

High Energy Physics - Phenomenology · Physics 2015-05-27 Eric Conte , Béranger Dumont , Benjamin Fuks , Thibaut Schmitt

MadAnalysis 5 is a new Python/C++ package facilitating phenomenological analyses that can be performed in the framework of Monte Carlo simulations of collisions to be produced in high-energy physics experiments. It allows, by means of a…

High Energy Physics - Phenomenology · Physics 2014-06-16 Eric Conte , Benjamin Fuks

Rules offer an invaluable combination of predictive and descriptive capabilities. Our package for rule-based data analysis, RuleKit, has proven its effectiveness in classification, regression, and survival problems. Here we present its…

Machine Learning · Computer Science 2025-04-30 Adam Gudyś , Cezary Maszczyk , Joanna Badura , Adam Grzelak , Marek Sikora , Łukasz Wróbel

This paper introduces reAnalyst, a framework designed to facilitate the study of reverse engineering (RE) practices through the semi-automated annotation of RE activities across various RE tools. By integrating tool-agnostic data collection…

Software Engineering · Computer Science 2025-03-18 Tab Zhang , Claire Taylor , Bart Coppens , Waleed Mebane , Christian Collberg , Bjorn De Sutter

Literature reviews are essential for any researcher trying to keep up to date with the burgeoning software engineering literature. FAST$^2$ is a novel tool for reducing the effort required for conducting literature reviews by assisting the…

Software Engineering · Computer Science 2018-11-16 Zhe Yu , Tim Menzies

Investigating cybersecurity incidents requires in-depth knowledge from the analyst. Moreover, the whole process is demanding due to the vast data volumes that need to be analyzed. While various techniques exist nowadays to help with…

Human-Computer Interaction · Computer Science 2021-03-08 Michal Beran , Frantisek Hrdina , Daniel Kouril , Radek Oslejsek , Kristina Zakopcanova

We introduce a new simplified fast detector simulator in the MadAnalysis 5 platform. The Python-like interpreter of the programme has been augmented by new commands allowing for a detector parametrisation through smearing and efficiency…

High Energy Physics - Phenomenology · Physics 2021-04-22 Jack Y. Araz , Benjamin Fuks , Georgios Polykratis

Two-sample hypothesis testing for network comparison presents many significant challenges, including: leveraging repeated network observations and known node registration, but without requiring them to operate; relaxing strong structural…

Methodology · Statistics 2024-02-05 Meijia Shao , Dong Xia , Yuan Zhang , Qiong Wu , Shuo Chen

We report on the design and results of the second reactive synthesis competition (SYNTCOMP 2015). We describe our extended benchmark library, with 6 completely new sets of benchmarks, and additional challenging instances for 4 of the…

Static analysis tools come in many forms andconfigurations, allowing them to handle various tasks in a (secure) development process: code style linting, bug/vulnerability detection, verification, etc., and adapt to the specific requirements…

Difficulty replicating baselines, high computational costs, and required domain expertise create persistent barriers to clinical AI research. To address these challenges, we introduce PyHealth 2.0, an enhanced clinical deep learning toolkit…

We introduce HackSynth, a novel Large Language Model (LLM)-based agent capable of autonomous penetration testing. HackSynth's dual-module architecture includes a Planner and a Summarizer, which enable it to generate commands and process…

Cryptography and Security · Computer Science 2024-12-03 Lajos Muzsai , David Imolai , András Lukács

This paper introduces Sparklen, a statistical learning toolkit for Hawkes processes in Python, designed to bring together efficiency and ease of use. The purpose of this package is to provide the Python community with a complete suite of…

Methodology · Statistics 2025-03-31 Romain Edmond Lacoste

SModelS is an automatized tool enabling the fast interpretation of simplified model results from the LHC within any model of new physics respecting a $\mathbb{Z}_2$ symmetry. In this contribution, we report on two important updates of…

At the CMS experiment, a growing reliance on the fast Monte Carlo application (FastSim) will accompany the high luminosity and detector granularity expected in Phase 2. The FastSim chain is roughly 10 times faster than the application based…

Instrumentation and Detectors · Physics 2025-01-15 Samuel Bein , Patrick Connor , Kevin Pedro , Peter Schleper , Moritz Wolf

SweepFinder is a popular program that implements a powerful likelihood-based method for detecting recent positive selection, or selective sweeps. Here, we present SweepFinder2, an extension of SweepFinder with increased sensitivity and…

Populations and Evolution · Quantitative Biology 2015-05-28 Michael DeGiorgio , Christian D. Huber , Melissa J. Hubisz , Ines Hellmann , Rasmus Nielsen

Across almost all scientific disciplines, the instruments that record our experimental data and the methods required for storage and data analysis are rapidly increasing in complexity. This gives rise to the need for scientific communities…

Physics Education · Physics 2018-09-26 Daniela Huppenkothen , Anthony Arendt , David W. Hogg , Karthik Ram , Jake VanderPlas , Ariel Rokem

Data-adaptive (machine learning-based) effect estimators are increasingly popular to reduce bias in high-dimensional bioinformatic and clinical studies (e.g. real-world data, target trials, -omic discovery). Their relative statistical…

Methodology · Statistics 2022-06-13 Xiang Meng , Jonathan Huang

The GooFit package provides physicists a simple, familiar syntax for manipulating probability density functions and performing fits, and is highly optimized for data analysis on NVIDIA GPUs and multithreaded CPU backends. GooFit was updated…

Mathematical Software · Computer Science 2017-10-26 Henry Schreiner , Christoph Hasse , Bradley Hittle , Himadri Pandey , Michael Sokoloff , Karen Tomko

We present version 2.3 of SModelS, a public tool for the fast reinterpretation of LHC searches for new physics on the basis of simplified-model results. The main new features are a database update with the latest available experimental…

High Energy Physics - Phenomenology · Physics 2023-11-08 Mohammad Mahdi Altakach , Sabine Kraml , Andre Lessa , Sahana Narasimha , Timothée Pascal , Wolfgang Waltenberger
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