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We propose a data-driven approach to represent neuronal network dynamics as a Probabilistic Graphical Model (PGM). Our approach learns the PGM structure by employing dimension reduction to network response dynamics evoked by stimuli applied…

Neurons and Cognition · Quantitative Biology 2017-11-02 Hexuan Liu , Jimin Kim , Eli Shlizerman

The neural encoding by biological sensors of flying insects, which prefilters stimulus data before sending it to the central nervous system in the form of voltage spikes, enables sensing capabilities that are computationally low-cost while…

Systems and Control · Electrical Eng. & Systems 2022-06-07 Burak Boyacıoğlu , Alice C. Schwarze , Bingni W. Brunton , Kristi A. Morgansen

Neural circuits in the brain perform a variety of essential functions, including input classification, pattern completion, and the generation of rhythms and oscillations that support processes such as breathing and locomotion. There is also…

Neurons and Cognition · Quantitative Biology 2024-10-16 Juliana Londono Alvarez

Foundation models have shown remarkable success in fitting biological visual systems; however, their black-box nature inherently limits their utility for understanding brain function. Here, we peek inside a SOTA foundation model of neural…

Neurons and Cognition · Quantitative Biology 2026-01-30 Johannes Bertram , Luciano Dyballa , Anderson Keller , Savik Kinger , Steven W. Zucker

How spiking neuronal networks encode memories in their different time and spatial scales constitute a fundamental topic in neuroscience and neuro-inspired engineering. Much attention has been paid to large networks and long-term memory, for…

Neurons and Cognition · Quantitative Biology 2023-03-23 Fabio Schittler Neves , Marc Timme

The ability of machine learning models to store input information in hidden layer vector embeddings, analogous to the concept of `memory', is widely employed but not well characterized. We find that language model embeddings typically…

Computation and Language · Computer Science 2026-05-20 Benjamin L. Badger

Advancing our knowledge of how the brain processes information remains a key challenge in neuroscience. This thesis combines three different approaches to the study of the dynamics of neural networks and their encoding representations: a…

Neurons and Cognition · Quantitative Biology 2024-02-21 Guillermo B. Morales

Motivation: Biological data and knowledge bases increasingly rely on Semantic Web technologies and the use of knowledge graphs for data integration, retrieval and federated queries. In the past years, feature learning methods that are…

Quantitative Methods · Quantitative Biology 2017-05-01 Mona Alshahrani , Mohammed Asif Khan , Omar Maddouri , Akira R Kinjo , Núria Queralt-Rosinach , Robert Hoehndorf

A core aspect of human intelligence is the ability to learn new tasks quickly and switch between them flexibly. Here, we describe a modular continual reinforcement learning paradigm inspired by these abilities. We first introduce a visual…

Machine Learning · Computer Science 2017-12-13 Kevin T. Feigelis , Blue Sheffer , Daniel L. K. Yamins

In the fields of computation and neuroscience, much is still unknown about the underlying computations that enable key cognitive functions including learning, memory, abstraction and behavior. This paper proposes a mathematical and…

Artificial Intelligence · Computer Science 2025-01-14 Jeet Singh

Embedding learning, a.k.a. representation learning, has been shown to be able to model large-scale semantic knowledge graphs. A key concept is a mapping of the knowledge graph to a tensor representation whose entries are predicted by models…

Artificial Intelligence · Computer Science 2016-05-10 Volker Tresp , Cristóbal Esteban , Yinchong Yang , Stephan Baier , Denis Krompaß

Working memory requires the brain to maintain information from the recent past to guide ongoing behavior. Neurons can contribute to this capacity by slowly integrating their inputs over time, creating persistent activity that outlasts the…

Neurons and Cognition · Quantitative Biology 2025-11-20 Nicoas Zucchet , Qianqian Feng , Axel Laborieux , Friedemann Zenke , Walter Senn , João Sacramento

We propose a novel architecture, the event-based GASSOM for learning and extracting invariant representations from event streams originating from neuromorphic vision sensors. The framework is inspired by feed-forward cortical models for…

Computer Vision and Pattern Recognition · Computer Science 2016-06-22 Thusitha N. Chandrapala , Bertram E. Shi

We consider the fundamental problem of learning a single neuron $x \mapsto\sigma(w^\top x)$ using standard gradient methods. As opposed to previous works, which considered specific (and not always realistic) input distributions and…

Machine Learning · Computer Science 2022-03-01 Gilad Yehudai , Ohad Shamir

Reservoir computing is a machine learning paradigm that transforms the transient dynamics of high-dimensional nonlinear systems for processing time-series data. Although reservoir computing was initially proposed to model information…

Neurons and Cognition · Quantitative Biology 2023-06-14 Takuma Sumi , Hideaki Yamamoto , Yuichi Katori , Satoshi Moriya , Tomohiro Konno , Shigeo Sato , Ayumi Hirano-Iwata

Given a natural language instruction and an input scene, our goal is to train a model to output a manipulation program that can be executed by the robot. Prior approaches for this task possess one of the following limitations: (i) rely on…

From CNNs to attention mechanisms, encoding inductive biases into neural networks has been a fruitful source of improvement in machine learning. Adding auxiliary losses to the main objective function is a general way of encoding biases that…

Machine Learning · Computer Science 2021-09-07 Ferran Alet , Maria Bauza , Kenji Kawaguchi , Nurullah Giray Kuru , Tomas Lozano-Perez , Leslie Pack Kaelbling

Using the reservoir computing framework, we demonstrate how a simple model can solve an alternation task without an explicit working memory. To do so, a simple bot equipped with sensors navigates inside a 8-shaped maze and turns…

Neural and Evolutionary Computing · Computer Science 2022-04-07 Naomi Chaix-Eichel , Snigdha Dagar , Quentin Lanneau , Karen Sobriel , Thomas Boraud , Frédéric Alexandre , Nicolas P. Rougier

Recording simultaneous activity of hundreds of neurons is now possible. Existing methods can model such population activity, but do not directly reveal the computations used by the brain. We present a fully unsupervised method that models…

Neurons and Cognition · Quantitative Biology 2020-03-24 Connor Brennan , Alex Proekt

Learning and inferring features that generate sensory input is a task continuously performed by cortex. In recent years, novel algorithms and learning rules have been proposed that allow neural network models to learn such features from…

Neurons and Cognition · Quantitative Biology 2021-04-13 Yasser Roudi , Graham Taylor