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We propose a unified probabilistic framework for sparse count tensors with excess zeros, motivated by single-cell Hi-C data. The observed data are naturally represented as a three-way tensor indexed by genomic loci pairs and cells,…

Methodology · Statistics 2026-04-27 Elena Tuzhilina , Yaoming Zhen

Geometric graph models of systems as diverse as proteins, robots, and mechanical structures from DNA assemblies to architected materials point towards a unified way to represent and control them in space and time. While much work has been…

Robotics · Computer Science 2022-08-24 Siheng Chen , Fabio Giardina , Gary P. T. Choi , L. Mahadevan

We propose a novel statistical model for sparse networks with overlapping community structure. The model is based on representing the graph as an exchangeable point process, and naturally generalizes existing probabilistic models with…

Methodology · Statistics 2025-02-06 Adrien Todeschini , Xenia Miscouridou , François Caron

Compressive sensing has been successfully used for optimized operations in wireless sensor networks. However, raw data collected by sensors may be neither originally sparse nor easily transformed into a sparse data representation. This…

Networking and Internet Architecture · Computer Science 2016-08-16 Mohammad Abu Alsheikh , Shaowei Lin , Hwee-Pink Tan , Dusit Niyato

This article proposes methods to model nonstationary temporal graph processes. This corresponds to modelling the observation of edge variables (relationships between objects) indicating interactions between pairs of nodes (or objects)…

Methodology · Statistics 2022-07-07 Maria Suveges , Sofia C. Olhede

Many real-world networks are theorized to have core-periphery structure consisting of a densely-connected core and a loosely-connected periphery. While this phenomenon has been extensively studied in a range of scientific disciplines, it…

Methodology · Statistics 2023-02-21 Eric Yanchenko , Srijan Sengupta

Many network systems are composed of interdependent but distinct types of interactions, which cannot be fully understood in isolation. These different types of interactions are often represented as layers, attributes on the edges or as a…

Physics and Society · Physics 2015-10-13 Tiago P. Peixoto

Many algorithms have been proposed for predicting missing edges in networks, but they do not usually take account of which edges are missing. We focus on networks which have missing edges of the form that is likely to occur in real…

Social and Information Networks · Computer Science 2011-11-22 Bowen Yan , Steve Gregory

We propose a new methodology to detect zero-inflation and overdispersion based on the comparison of the expected sample extremes among convexly ordered distributions. The method is very flexible and includes tests for the proportion of…

Methodology · Statistics 2008-09-25 A. Baillo , J. Carcamo , J. R. Berrendero

Network inference has been extensively studied in several fields, such as systems biology and social sciences. Learning network topology and internal dynamics is essential to understand mechanisms of complex systems. In particular, sparse…

Machine Learning · Statistics 2022-06-13 Yasen Wang , Junyang Jin , Jorge Goncalves

Analyzing high-dimensional count data is a challenge and statistical model-based approaches provide an adequate and efficient framework that preserves explainability. The (multivariate) Poisson-Log-Normal (PLN) model is one such model: it…

Methodology · Statistics 2025-09-15 Bastien Batardière , Julien Chiquet , François Gindraud , Mahendra Mariadassou

The functional and structural representation of the brain as a complex network is marked by the fact that the comparison of noisy and intrinsically correlated high-dimensional structures between experimental conditions or groups shuns…

Neurons and Cognition · Quantitative Biology 2013-10-25 Tommaso Furlanello , Marco Cristoforetti , Cesare Furlanello , Giuseppe Jurman

Modern online platforms offer users an opportunity to participate in a variety of content-creation, social networking, and shopping activities. With the rapid proliferation of such online services, learning data-driven user behavior models…

Machine Learning · Computer Science 2022-03-01 Aravind Sankar

Network models, in which psychopathological disorders are conceptualized as a complex interplay of psychological and biological components, have become increasingly popular in the recent psychopathological literature. These network models…

Neurons and Cognition · Quantitative Biology 2017-09-13 Sacha Epskamp , Joost Kruis , Maarten Marsman

In this paper we propose a Bayesian nonparametric approach to modelling sparse time-varying networks. A positive parameter is associated to each node of a network, which models the sociability of that node. Sociabilities are assumed to…

Machine Learning · Statistics 2022-04-18 Cian Naik , Francois Caron , Judith Rousseau , Yee Whye Teh , Konstantina Palla

I investigate multi-field inflationary models with fields that decay during inflation, leading to staggered inflation. This feature is natural in many models motivated by string theory, for instance if inflatons are related to interbrane…

Astrophysics · Physics 2010-01-08 Thorsten Battefeld

While there has been tremendous activity in the area of statistical network inference on graphs, hypergraphs have not enjoyed the same attention, on account of their relative complexity and the lack of tractable statistical models. We…

Methodology · Statistics 2025-04-15 Ga-Ming Angus Chan , Zachary Lubberts

Relationship between agents can be conveniently represented by graphs. When these relationships have different modalities, they are better modelled by multilayer graphs where each layer is associated with one modality. Such graphs arise…

Machine Learning · Statistics 2021-03-05 Guillaume Braun , Hemant Tyagi , Christophe Biernacki

A large number of complex systems find a natural abstraction in the form of weighted networks whose nodes represent the elements of the system and the weighted edges identify the presence of an interaction and its relative strength. In…

Physics and Society · Physics 2009-04-23 M. Angeles Serrano , Marian Boguna , Alessandro Vespignani

We propose an information-based model for network dynamics in which imperfect information leads to networks where the different vertices have widely different number of edges to other vertices, and where the topology has hierarchical…

Disordered Systems and Neural Networks · Physics 2007-05-23 Martin Rosvall , Kim Sneppen
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