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Drug repurposing is often framed as a candidate identification task, but existing approaches provide limited guidance for distinguishing biologically plausible candidates from historically well-connected ones. Here we introduce DrugKLM, a…

Text generation has become one of the most important yet challenging tasks in natural language processing (NLP). The resurgence of deep learning has greatly advanced this field by neural generation models, especially the paradigm of…

Computation and Language · Computer Science 2021-05-26 Junyi Li , Tianyi Tang , Wayne Xin Zhao , Ji-Rong Wen

Graph neural networks (GNNs) have emerged as state-of-the-art methods to learn from graph-structured data for recommendation. However, most existing GNN-based recommendation methods focus on the optimization of model structures and learning…

Information Retrieval · Computer Science 2025-07-02 Rong Shan , Jianghao Lin , Chenxu Zhu , Bo Chen , Menghui Zhu , Kangning Zhang , Jieming Zhu , Ruiming Tang , Yong Yu , Weinan Zhang

As large language models (LLMs) generate text that increasingly resembles human writing, the subtle cues that distinguish AI-generated content from human-written content become increasingly challenging to capture. Reliance on…

Computation and Language · Computer Science 2026-04-16 Xiao Pu , Zepeng Cheng , Lin Yuan , Yu Wu , Xiuli Bi

The rapid advancement of large language models (LLMs) has made detecting AI-generated text an increasingly critical challenge. Traditional methods often fail to capture the nuanced semantic differences between human and machine-generated…

Computation and Language · Computer Science 2025-02-03 Lifu Gao , Ziwei Liu , Qi Zhang

Large language models (LLMs) have revolutionized AI, but are constrained by limited context windows, hindering their utility in tasks like extended conversations and document analysis. To enable using context beyond limited context windows,…

Artificial Intelligence · Computer Science 2024-02-13 Charles Packer , Sarah Wooders , Kevin Lin , Vivian Fang , Shishir G. Patil , Ion Stoica , Joseph E. Gonzalez

Large Language Models (LLMs) have achieved remarkable success in natural language processing through strong semantic understanding and generation. However, their black-box nature limits structured and multi-hop reasoning. In contrast,…

Computation and Language · Computer Science 2025-10-27 Guangxin Su , Hanchen Wang , Jianwei Wang , Wenjie Zhang , Ying Zhang , Jian Pei

Optimizing software performance through automated code refinement offers a promising avenue for enhancing execution speed and efficiency. Despite recent advancements in LLMs, a significant gap remains in their ability to perform in-depth…

Software Engineering · Computer Science 2025-01-30 Manish Acharya , Yifan Zhang , Kevin Leach , Yu Huang

Identifying bias in LLM-generated content is a crucial prerequisite for ensuring fairness in LLMs. Existing methods, such as fairness classifiers and LLM-based judges, face limitations related to difficulties in understanding underlying…

Computation and Language · Computer Science 2025-06-11 Zhiting Fan , Ruizhe Chen , Zuozhu Liu

Large Language Models (LLMs) have demonstrated remarkable capabilities in modeling sequential textual data and generalizing across diverse tasks. However, adapting LLMs to effectively handle structural data, such as knowledge graphs or web…

Computation and Language · Computer Science 2025-11-12 Jiarui Feng , Donghong Cai , Yixin Chen , Muhan Zhang

Large Language Models (LLMs) excel at both informal and formal (e.g. Lean 4) mathematical reasoning but still struggle with autoformalisation, the task of transforming informal into formal mathematical statements. Autoformalisation helps…

Computation and Language · Computer Science 2025-10-15 Yupei Li , Philipp Borchert , Gerasimos Lampouras

Foundation models like ChatGPT and GPT-4 have revolutionized artificial intelligence, exhibiting remarkable abilities to generalize across a wide array of tasks and applications beyond their initial training objectives. However, graph…

Machine Learning · Computer Science 2025-01-22 Yufei He , Yuan Sui , Xiaoxin He , Bryan Hooi

Large Audio Language Models (LALMs) have garnered significant research interest. Despite being built upon text-based large language models (LLMs), LALMs frequently exhibit a degradation in knowledge and reasoning capabilities. We…

Training deep neural networks from scratch on natural language processing (NLP) tasks requires significant amount of manually labeled text corpus and substantial time to converge, which usually cannot be satisfied by the customers. In this…

Computation and Language · Computer Science 2019-10-29 Yunzhe Tao , Saurabh Gupta , Satyapriya Krishna , Xiong Zhou , Orchid Majumder , Vineet Khare

Large Language Models (LLMs) are being adopted at an unprecedented rate, yet still face challenges in knowledge-intensive domains like biomedicine. Solutions such as pre-training and domain-specific fine-tuning add substantial computational…

In this paper we introduce ResearchCodeAgent, a novel multi-agent system leveraging large language models (LLMs) agents to automate the codification of research methodologies described in machine learning literature. The system bridges the…

Software Engineering · Computer Science 2025-05-06 Shubham Gandhi , Dhruv Shah , Manasi Patwardhan , Lovekesh Vig , Gautam Shroff

Multimodal Retrieval-Augmented Generation (RAG) has emerged as an effective paradigm for enhancing Large Language Models (LLMs) with external knowledge. However, existing multimodal RAG systems predominantly rely on coarse-grained…

Information Retrieval · Computer Science 2026-05-25 Yifan Zhu , Yu Mi , Yue Lu , Yanchu Guan , Zhixuan Chu

Large Language Models (LLMs) possess an extraordinary capability to produce text that is not only coherent and contextually relevant but also strikingly similar to human writing. They adapt to various styles and genres, producing content…

Computation and Language · Computer Science 2025-07-08 Chinnappa Guggilla , Budhaditya Roy , Trupti Ramdas Chavan , Abdul Rahman , Edward Bowen

Diffusion-based generative models have significantly advanced text-to-image generation but encounter challenges when processing lengthy and intricate text prompts describing complex scenes with multiple objects. While excelling in…

Computer Vision and Pattern Recognition · Computer Science 2024-02-27 Hanan Gani , Shariq Farooq Bhat , Muzammal Naseer , Salman Khan , Peter Wonka

Large Language Models (LLMs) are being used more and more extensively for automated evaluation in various scenarios. Previous studies have attempted to fine-tune open-source LLMs to replicate the evaluation explanations and judgments of…

Computation and Language · Computer Science 2025-05-28 Kaishuai Xu , Tiezheng Yu , Wenjun Hou , Yi Cheng , Liangyou Li , Xin Jiang , Lifeng Shang , Qun Liu , Wenjie Li