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The adoption of Transformer-based architectures in the medical domain is growing rapidly. In medical imaging, the analysis of complex shapes - such as organs, tissues, or other anatomical structures - combined with the often anisotropic…

Computer Vision and Pattern Recognition · Computer Science 2025-09-03 Nabil Jabareen , Dongsheng Yuan , Dingming Liu , Foo-Wei Ten , Sören Lukassen

A multi-layer perceptron (MLP) is a type of neural networks which has a long history of research and has been studied actively recently in computer vision and graphics fields. One of the well-known problems of an MLP is the capability of…

Graphics · Computer Science 2023-10-31 Shin Fujieda , Atsushi Yoshimura , Takahiro Harada

Grid cells in the medial entorhinal cortex (MEC) of the mammalian brain exhibit a strikingly regular hexagonal firing field over space. These cells are learned after birth and are thought to support spatial navigation but also more abstract…

Neurons and Cognition · Quantitative Biology 2024-10-07 Mufeng Tang , Helen Barron , Rafal Bogacz

The distinguishing power of graph transformers is closely tied to the choice of positional encoding: features used to augment the base transformer with information about the graph. There are two primary types of positional encoding:…

Machine Learning · Computer Science 2024-08-26 Mitchell Black , Zhengchao Wan , Gal Mishne , Amir Nayyeri , Yusu Wang

Grid cells enable the brain to model the physical space of the world and navigate effectively via path integration, updating self-position using information from self-movement. Recent proposals suggest that the brain might use similar…

Artificial Intelligence · Computer Science 2021-02-19 Niels Leadholm , Marcus Lewis , Subutai Ahmad

Tables are ubiquitous across various domains for concisely representing structured information. Empowering large language models (LLMs) to reason over tabular data represents an actively explored direction. However, since typical LLMs only…

Computation and Language · Computer Science 2024-10-21 Jia-Nan Li , Jian Guan , Wei Wu , Zhengtao Yu , Rui Yan

We introduce a novel positional encoding strategy for Transformer-style models, addressing the shortcomings of existing, often ad hoc, approaches. Our framework provides a flexible mapping from the algebraic specification of a domain to an…

Machine Learning · Computer Science 2024-11-01 Konstantinos Kogkalidis , Jean-Philippe Bernardy , Vikas Garg

Vision transformers have demonstrated significant advantages in computer vision tasks due to their ability to capture long-range dependencies and contextual relationships through self-attention. However, existing position encoding…

Computer Vision and Pattern Recognition · Computer Science 2025-05-15 Xi Chen , Shiyang Zhou , Muqi Huang , Jiaxu Feng , Yun Xiong , Kun Zhou , Biao Yang , Yuhui Zhang , Huishuai Bao , Sijia Peng , Chuan Li , Feng Shi

Spiking neural networks (SNNs) are bio-inspired networks that mimic how neurons in the brain communicate through discrete spikes, which have great potential in various tasks due to their energy efficiency and temporal processing…

Neural and Evolutionary Computing · Computer Science 2025-10-14 Changze Lv , Yansen Wang , Dongqi Han , Yifei Shen , Xiaoqing Zheng , Xuanjing Huang , Dongsheng Li

Implicit neural representations (INRs) are increasingly being used as tools to map coordinates to signals, encompassing applications from neural fields to texture compression, shape representations, and beyond. Most INR methods are based on…

Computer Vision and Pattern Recognition · Computer Science 2026-04-28 Guillaume Perez , Janarbek Matai , Takahiro Harada

Transformer architectures rely on position encodings to model the spatial structure of input data. Rotary Position Encoding (RoPE) is a widely used method in language models that encodes relative positions through fixed, block-diagonal,…

Computer Vision and Pattern Recognition · Computer Science 2025-08-19 Sophie Ostmeier , Brian Axelrod , Maya Varma , Michael E. Moseley , Akshay Chaudhari , Curtis Langlotz

Neural shape representation generally refers to representing 3D geometry using neural networks, e.g., computing a signed distance or occupancy value at a specific spatial position. In this paper we present a neural-network architecture…

Machine Learning · Computer Science 2024-08-22 Stefan Rhys Jeske , Jonathan Klein , Dominik L. Michels , Jan Bender

Graph neural networks (GNNs) provide a powerful and scalable solution for modeling continuous spatial data. However, they often rely on Euclidean distances to construct the input graphs. This assumption can be improbable in many real-world…

Machine Learning · Computer Science 2023-02-20 Konstantin Klemmer , Nathan Safir , Daniel B. Neill

Positional encodings are a common component of neural scene reconstruction methods, and provide a way to bias the learning of neural fields towards coarser or finer representations. Current neural surface reconstruction methods use a…

Computer Vision and Pattern Recognition · Computer Science 2024-12-09 Thomas Walker , Octave Mariotti , Amir Vaxman , Hakan Bilen

Transformers have emerged as a universal backbone across 3D perception, video generation, and world models for autonomous driving and embodied AI, where understanding camera geometry is essential for grounding visual observations in…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Cheng Zhang , Boying Li , Meng Wei , Yan-Pei Cao , Camilo Cruz Gambardella , Dinh Phung , Jianfei Cai

Multimodal time series forecasting is foundational in various fields, such as utilizing satellite imagery and numerical data for predicting typhoons in climate science. However, existing multimodal approaches primarily focus on utilizing…

Machine Learning · Computer Science 2025-06-19 Haobo Li , Eunseo Jung , Zixin Chen , Zhaowei Wang , Yueya Wang , Huamin Qu , Alexis Kai Hon Lau

Graph transformers need strong inductive biases to derive meaningful attention scores. Yet, current methods often fall short in capturing longer ranges, hierarchical structures, or community structures, which are common in various graphs…

Machine Learning · Computer Science 2024-05-28 Yuankai Luo , Hongkang Li , Lei Shi , Xiao-Ming Wu

Fourier-like summation of several grid cell modules with different spatial frequencies in the medial entorhinal cortex (MEC) has long been proposed to form the contours of place firing fields. Recent experiments largely, but not completely,…

Neurons and Cognition · Quantitative Biology 2019-10-15 Taiping Zeng , XiaoLi Li , Bailu Si

We present GRAPE (Group Representational Position Encoding), a unified framework for positional encoding based on group actions. GRAPE unifies two families of mechanisms: (i) multiplicative rotations (Multiplicative GRAPE) in…

Machine Learning · Computer Science 2026-05-15 Yifan Zhang , Zixiang Chen , Yifeng Liu , Zhen Qin , Huizhuo Yuan , Kangping Xu , Yang Yuan , Quanquan Gu , Andrew Chi-Chih Yao

Global placement, a critical step in designing the physical layout of computer chips, is essential to optimize chip performance. Prior global placement methods optimize each circuit design individually from scratch. Their neglect of…

Machine Learning · Computer Science 2025-03-27 Yunbo Hou , Haoran Ye , Shuwen Yang , Yingxue Zhang , Siyuan Xu , Guojie Song