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Related papers: Nanoparticle uptake by a semi-permeable, spherical…

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A general topic of current interest is the analysis of diffusion problems in singularly perturbed domains with small interior targets or traps (the narrow capture problem). One major application is to intracellular diffusion, where the…

Statistical Mechanics · Physics 2022-04-13 Paul C. Bressloff

The cellular uptake of self-propelled nanoparticles (NPs) or viruses, usually nonspherical, by cell membrane is crucial in many biological processes. In this study, using Onsager variational principle, we obtain a general wrapping equation…

Soft Condensed Matter · Physics 2023-01-16 Ke Xiao , Rui Ma , Chen-Xu Wu

We perform molecular dynamics simulations to understand the translational and rotational diffusion of Janus nanoparticles at the interface between two immiscible fluids. Considering spherical particles with different affinity to fluid…

Fluid Dynamics · Physics 2016-05-04 Hossein Rezvantalab , German Drazer , Shahab Shojaei-Zadeh

In 1977 Berg & Purcell published a landmark paper entitled "Physics of Chemoreception" which examined how a bacterium can sense a chemical attractant in the fluid surrounding it. At small scales the attractant molecules move by Brownian…

Analysis of PDEs · Mathematics 2017-07-18 Andrew J. Bernoff , Alan E. Lindsay

We study light absorption by a dipolar absorber in a given environment, which can be a nanoantenna or any complex inhomogeneous medium. From first-principle calculations, we derive an upper bound for the absorption, which decouples the…

Advances in nanotechnology lead to an increasing interest in how nanoparticles interact with biomembranes. Nanoparticles are wrapped spontaneously by biomembranes if the adhesive interactions between the particles and membranes compensate…

Subcellular Processes · Quantitative Biology 2016-09-16 Michael Raatz , Thomas R. Weikl

The optically induced oscillatory response of a spherical two-component, shell-core structured, nanoparticle by nodeless elastic vibrations of soft peripheral shell against hard and dynamically immobile inner core is considered. The…

Soft Condensed Matter · Physics 2009-11-13 S. I. Bastrukov , P. -Y. Lai , I. V. Molodtsova , H. -K. Chang , D. V. Podgainy

The dispersive spreading of microscopic particles in shear flows is influenced both by advection and thermal motion. At the nanoscale, interactions between such particles and their confining boundaries become unavoidable. We address the…

Soft Condensed Matter · Physics 2023-02-01 Alexandre Vilquin , Vincent Bertin , Elie Raphaël , David S Dean , Thomas Salez , Joshua D. McGraw

We determine the asymptotic spreading speed of an invasive species, which invades the territory of a native competitor, governed by a diffusive competition model with a free boundary in a spherically symmetric setting. This free boundary…

Analysis of PDEs · Mathematics 2015-06-19 Yihong Du , Mingxin Wang , Maolin Zhou

Chemical reactions inside cells are generally considered to happen within fixed-size compartments. Needless to say, cells and their compartments are highly dynamic. Thus, such stringent assumptions may not reflect biochemical reality, and…

Quantitative Methods · Quantitative Biology 2016-02-17 Atiyo Ghosh , Tatiana T. Marquez-Lago

We consider processes that coincide with a given diffusion process except on the boundaries of a finite collection of domains. The behavior on each of the boundaries is asymmetric: the process is much more likely to enter the interior of…

Probability · Mathematics 2020-03-18 Mark Freidlin , Leonid Koralov

The problem of the time required for a diffusing molecule, within a large bounded domain, to first locate a small target is prevalent in biological modeling. Here we study this problem for a small spherical target. We develop uniform in…

Biological Physics · Physics 2013-08-06 Samuel A. Isaacson , Jay Newby

We investigate the long time behavior of a passive particle evolving in a one-dimensional diffusive random environment, with diffusion constant $D$. We consider two cases: (a) The particle is pulled forward by a small external constant…

Statistical Mechanics · Physics 2018-04-16 François Huveneers

How many times a diffusing molecule can permeate across a membrane or be adsorbed on a substrate? We employ the encounter-based approach to find the statistics of adsorption or permeation events for molecular diffusion in a general…

Chemical Physics · Physics 2025-07-15 Denis S. Grebenkov

Using molecular dynamics simulations, we show that an asymmetrically shaped nanoparticle in dilute solution possesses a spontaneously curved trajectory within finite time interval, instead of the generally expected random walk. This…

Soft Condensed Matter · Physics 2016-10-13 Nan Sheng , YuSong Tu , Pan Guo , RongZheng Wan , ZuoWei Wang , HaiPing Fang

This paper considers membranes of globular structure in the framework of the cell model technique. Coupled micropolar and Brinkman-type equations are used to model the flow of micropolar fluid through a spherical cell, consisting of solid…

Fluid Dynamics · Physics 2020-05-05 D. Yu. Khanukaeva

In the present work, the behavior of vacancy pore inside of spherical particle is investigated. On the assumption of quasistationarity of diffusion fluxes, the nonlinear equation set was obtained analytically, that describes completely pore…

Mesoscale and Nanoscale Physics · Physics 2018-09-19 V. V. Yanovsky , M. I. Kopp , M. A. Ratner

Cells offer numerous inspiring examples where proteins and membranes combine to form complex structures that are key to intracellular compartmentalization, cargo transport, and specialization of cell morphology. Despite this wealth of…

The short diffusion lengths in insertion battery nanoparticles render the capacitive behavior of bounded diffusion, which is rarely observable with conventional larger particles, now accessible to impedance measurements. Coupled with…

Chemical Physics · Physics 2012-05-31 J. Song , M. Z. Bazant

We study the time-harmonic scattering by a heterogeneous object covered with a thin layer of randomly distributed sound-soft nanoparticles. The size of the particles, their distance between each other and the layer's thickness are all of…

Analysis of PDEs · Mathematics 2026-01-13 Amandine Boucart , Sonia Fliss , Laure Giovangigli