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Consider a tree $T=(V,E)$ with root $\circ$ and edge length function $\ell:E\to\mathbb{R}_+$. The phylogenetic covariance matrix of $T$ is the matrix $C$ with rows and columns indexed by $L$, the leaf set of $T$, with entries…

Populations and Evolution · Quantitative Biology 2025-09-22 Sean P. Svihla , Manuel E. Lladser

The concept of pedant tree-connectivity was introduced by Hager in 1985. For a graph $G=(V,E)$ and a set $S\subseteq V(G)$ of at least two vertices, \emph{an $S$-Steiner tree} or \emph{a Steiner tree connecting $S$} (or simply, \emph{an…

Combinatorics · Mathematics 2015-08-31 Yaping Mao

In the rectilinear Steiner arborescence problem the task is to build a shortest rectilinear Steiner tree connecting a given root and a set of terminals which are placed in the plane such that all root-terminal-paths are shortest paths. This…

Computational Complexity · Computer Science 2015-08-28 Jens Maßberg

We consider a regular $n$-ary tree of height $h$, for which every vertex except the root is labelled with an independent and identically distributed continuous random variable. Taking motivation from a question in evolutionary biology, we…

Probability · Mathematics 2013-11-14 Matthew I. Roberts , Lee Zhuo Zhao

An optimal binary search tree for an access sequence on elements is a static tree that minimizes the total search cost. Constructing perfectly optimal binary search trees is expensive so the most efficient algorithms construct almost…

Data Structures and Algorithms · Computer Science 2018-06-28 Mordecai Golin , John Iacono , Stefan Langerman , J. Ian Munro , Yakov Nekrich

A hierarchy on a set $S$, also called a total partition of $S$, is a collection $\mathcal{H}$ of subsets of $S$ such that $S \in \mathcal{H}$, each singleton subset of $S$ belongs to $\mathcal{H}$, and if $A, B \in \mathcal{H}$ then $A \cap…

Probability · Mathematics 2017-09-14 Noah Forman , Chris Haulk , Jim Pitman

In this article, Temperley's bijection between spanning trees of the square grid on the one hand, and perfect matchings (also known as dimer coverings) of the square grid on the other, is extended to the setting of general planar directed…

Combinatorics · Mathematics 2007-05-23 Richard W. Kenyon , James G. Propp , David B. Wilson

We describe a polynomial-time algorithm which, given a graph $G$ with treewidth $t$, approximates the pathwidth of $G$ to within a ratio of $O(t\sqrt{\log t})$. This is the first algorithm to achieve an $f(t)$-approximation for some…

Data Structures and Algorithms · Computer Science 2023-03-13 Carla Groenland , Gwenaël Joret , Wojciech Nadara , Bartosz Walczak

This paper is motivated by the following question: what are the unavoidable induced subgraphs of graphs with large treewidth? Aboulker et al. made a conjecture which answers this question in graphs of bounded maximum degree, asserting that…

Given a directed graph $G$ and a list $(s_1,t_1),\dots,(s_d,t_d)$ of terminal pairs, the Directed Steiner Network problem asks for a minimum-cost subgraph of $G$ that contains a directed $s_i\to t_i$ path for every $1\le i \le k$. The…

Data Structures and Algorithms · Computer Science 2022-11-11 Andreas Emil Feldmann , Daniel Marx

It is known that the size of the largest common subtree (i.e., the maximum agreement subtree) of two independent random binary trees with $n$ given labeled leaves is of order between $n^{0.366}$ and $n^{1/2}$. We improve the lower bound to…

Probability · Mathematics 2023-02-06 Ali Khezeli

We introduce generalizations of Aldous' Brownian Continuous Random Tree as scaling limits for multicritical models of discrete trees. These discrete models involve trees with fine-tuned vertex-dependent weights ensuring a k-th root…

Mathematical Physics · Physics 2007-05-23 J. Bouttier , P. Di Francesco , E. Guitter

A long-standing conjecture on spanning trees of a hypercube states that a balanced tree on $2^n$ vertices with maximum degree at most $3$ spans the hypercube of dimension $n$ \cite{havel1986}. In this paper, we settle the conjecture for a…

Combinatorics · Mathematics 2021-10-13 Rishikant Rajdeepak , V. Sunitha

In this paper we study a variation of the accessibility percolation model, this is also motivated by evolutionary biology and evolutionary computation. Consider a tree whose vertices are labeled with random numbers. We study the probability…

Probability · Mathematics 2018-06-28 Frank Duque , Alejandro Roldán-Correa , Leon A. Valencia

We apply the theory of Bruhat-Tits trees to the study of optimal embeddings of two and three dimensional commutative orders into quaternion algebras. Specifically, we determine how many conjugacy classes of global Eichler orders in a…

Number Theory · Mathematics 2016-06-22 Manuel Arenas , Luis Arenas-Carmona , Jaime Contreras

We consider a general metric Steiner problem which is of finding a set $\mathcal{S}$ with minimal length such that $\mathcal{S} \cup A$ is connected, where $A$ is a given compact subset of a given complete metric space $X$; a solution is…

Metric Geometry · Mathematics 2023-02-07 D. Cherkashin , Y. Teplitskaya

We are interested in the quantitative analysis of the compaction ratio for two classical families of trees: recursive trees and plane binary increasing trees. These families are typical representatives of tree models with a small depth.…

Combinatorics · Mathematics 2021-09-14 Olivier Bodini , Antoine Genitrini , Bernhard Gittenberger , Isabella Larcher , Mehdi Naima

The paper establishes a weak version of Horton self-similarity for a tree representation of Kingman's coalescent process. The proof is based on a Smoluchowski-type system of ordinary differential equations for the number of branches of a…

Probability · Mathematics 2015-09-29 Yevgeniy Kovchegov , Ilya Zaliapin

We introduce some classes of increasing labeled and multilabeled trees, and we show that these trees provide combinatorial interpretations for certain Thron-type continued fractions with coefficients that are quasi-affine of period 2. Our…

Combinatorics · Mathematics 2024-12-16 Veronica Bitonti , Bishal Deb , Alan D. Sokal

We prove that for all $0\leq t\leq k$ and $d\geq 2k$, every graph $G$ with treewidth at most $k$ has a `large' induced subgraph $H$, where $H$ has treewidth at most $t$ and every vertex in $H$ has degree at most $d$ in $G$. The order of $H$…

Combinatorics · Mathematics 2007-05-23 Prosenjit Bose , Vida Dujmovic , David R. Wood
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