Related papers: Evolutionary Khovanov homology
TDA (topological data analysis) is a relatively new area of research related to importing classical ideas from topology into the realm of data analysis. Under the umbrella term TDA, there falls, in particular, the notion of persistent…
Lord Kelvin's pioneering hypothesis that the identity of atoms is knots of vortices of the aether had a profound impact on the fields of mathematics and physics despite being subsequently refuted by experiments. While knot-like excitations…
Performing link prediction using knowledge graph embedding models has become a popular approach for knowledge graph completion. Such models employ a transformation function that maps nodes via edges into a vector space in order to measure…
The combinatorial approach to knot theory treats knots as diagrams modulo Reidemeister moves. Many constructions of knot invariants (e.g., index polynomials, quandle colorings, etc.) use elements of diagrams such as arcs and crossings by…
We introduce the notion of a Khovanov-Floer theory. Roughly, such a theory assigns a filtered chain complex over Z/2 to a link diagram such that (1) the E_2 page of the resulting spectral sequence is naturally isomorphic to the Khovanov…
The art of tying knots is exploited in nature and occurs in multiple applications ranging from being an essential part of scouting programs to engineering molecular knots. Biomolecular knots, such as knotted proteins, bear various cellular…
The quandle homology theory is generalized to the case when the coefficient groups admit the structure of Alexander quandles, by including an action of the infinite cyclic group in the boundary operator. Theories of Alexander extensions of…
We propose a gauge model of quantum electrodynamics (QED) and its nonabelian generalization from which we derive knot invariants such as the Jones polynomial. Our approach is inspired by the work of Witten who derived knot invariants from…
Khovanov homology is a recently introduced invariant of oriented links in $\mathbb{R}^3$. It categorifies the Jones polynomial in the sense that the (graded) Euler characteristic of the Khovanov homology is a version of the Jones polynomial…
A homological invariant of 3-manifolds is defined, using abelian Yang-Mills gauge theory. It is shown that the construction, in an appropriate sense, is functorial with respect to the families of 4-dimensional cobordisms. This construction…
In the classical knot theory there is a well-known notion of descending diagram. From an arbitrary diagram one can easily obtain, by some crossing changes, a descending diagram which is a diagram of the unknot or unlink. In this paper the…
We give a combinatorial treatment of transverse homology, a new invariant of transverse knots that is an extension of knot contact homology. The theory comes in several flavors, including one that is an invariant of topological knots and…
We introduce and study knotoids. Knotoids are represented by diagrams in a surface which differ from the usual knot diagrams in that the underlying curve is a segment rather than a circle. Knotoid diagrams are considered up to Reidemeister…
A powerful way to study groups is via their actions on suitable spaces. Classifying spaces for families of subgroups are a type of these spaces, obtained by imposing some strict conditions on the fixed-point sets. We show how in the…
We examine knotted solutions, the most simple of which is the "Hopfion", from the point of view of relations between electromagnetism and ideal fluid dynamics. A map between fluid dynamics and electromagnetism works for initial conditions…
Knot physics is the theory of the universe that not only unified all the fundamental interactions but also explores the underlying physics of quantum mechanics. In knot physics, the most important physical result is the unification of…
We examine computer experiments that can be performed to understand the dynamics of knots under self-repulsion. In the course of specific computer exploration we use the knot theory of rational knots and rational tangles to produce classes…
We consider knot theories possessing a {\em parity}: each crossing is decreed {\em odd} or {\em even} according to some universal rule. If this rule satisfies some simple axioms concerning the behaviour under Reidemeister moves, this leads…
Link homology theories (such as knot Floer homology and Khovanov homology) have become indispensable tools for studying knots and links, including powerful 4-dimensional obstructions. These notes, based on lectures given at the 2024 Georgia…
A handlebody-knot is a handlebody embedded in the 3-sphere. We establish a uniform method to construct invariants for handlebody-links. We introduce the category $\mathcal{T}$ of handlebody-tangles and present it by generators and…