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Related papers: Evolutionary Khovanov homology

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The mathematical theory of knots studies the embeddings of circles into the space $\mathbb{R}^3$, being the classification one of the fundamental problems. The introduction of homology theories results in complex mathematical structures…

History and Overview · Mathematics 2023-09-07 Gabriel Montoya-Vega

Knot data analysis (KDA), which studies data with curve-type structures such as knots, links, and tangles, has emerging as a promising geometric topology approach in data science. While evolutionary Khovanov homology has been developed to…

Geometric Topology · Mathematics 2025-09-23 Jian Liu , Li Shen , Guo-Wei Wei

In the past decade, topological data analysis (TDA) has emerged as a powerful approach in data science. The main technique in TDA is persistent homology, which tracks topological invariants over the filtration of point cloud data using…

Geometric Topology · Mathematics 2023-11-23 Li Shen , Hongsong Feng , Fengling Li , Fengchun Lei , Jie Wu , Guo-Wei Wei

Besides offering a friendly introduction to knot homologies and quantum curves, the goal of these lectures is to review some of the concrete predictions that follow from the physical interpretation of knot homologies. In particular, this…

High Energy Physics - Theory · Physics 2016-10-28 Sergei Gukov , Ingmar Saberi

Knot, link, and tangle theory is crucial in both mathematical theory and practical application, including quantum physics, molecular biology, and structural chemistry. Unlike knots and links, tangles impose more relaxed constraints,…

Geometric Topology · Mathematics 2025-08-21 Li Shen , Jian Liu , Guo-Wei Wei

We give a fresh introduction to the Khovanov Homology theory for knots and links, with special emphasis on its extension to tangles, cobordisms and 2-knots. By staying within a world of topological pictures a little longer than in other…

Geometric Topology · Mathematics 2014-11-11 Dror Bar-Natan

This is an introductory article on high dimensional knots for the beginners. High dimensional knot theory is an exciting field. It is a field of knot theory, which is one of topology and is connected with many ones. In this article we use…

Geometric Topology · Mathematics 2018-04-13 Eiji Ogasa

We construct an algebra of non-trivial homological operations on Khovanov homology with coefficients in $\mathbb Z_2$ generated by two Bockstein operations. We use the unified Khovanov homology theory developed by the first author to lift…

Algebraic Topology · Mathematics 2016-01-06 Krzysztof K. Putyra , Alexander N. Shumakovitch

This is an expository paper discussing various versions of Khovanov homology theories, interrelations between them, their properties, and their applications to other areas of knot theory and low-dimensional topology.

Geometric Topology · Mathematics 2011-01-31 Alexander Shumakovitch

Knot contact homology studies symplectic and contact geometric properties of conormals of knots in 3-manifolds using holomorphic curve techniques. It has connections to both mathematical and physical theories. On the mathematical side, we…

Symplectic Geometry · Mathematics 2017-11-20 Tobias Ekholm

Embedded contact knot homology (ECK) is a variation on Embedded contact homology (ECH), defined with respect to an open book decomposition compatible with a contact structure on some 3-manifold, M. The knot in question is given by the…

Geometric Topology · Mathematics 2019-02-12 Thomas A. G. Brown

Knot theory provides a powerful tool for the understanding of topological matters in biology, chemistry, and physics. Here knot theory is introduced to describe topological phases in the quantum spin system. Exactly solvable models with…

Strongly Correlated Electrons · Physics 2019-06-24 X. M. Yang , L. Jin , Z. Song

This paper proposes the definition of a quantum knot as a linear superposition of classical knots in three dimensional space. The definition is constructed and examples are discussed. Then the paper details extensions and also limitations…

Quantum Physics · Physics 2009-11-10 Louis H. Kauffman , Samuel J. Lomonaco

We study here global and local entanglements of open protein chains by implementing the concept of knotoids. Knotoids have been introduced in 2012 by Vladimir Turaev as a generalization of knots in 3-dimensional space. More precisely,…

Biomolecules · Quantitative Biology 2018-06-06 Dimos Goundaroulis , Julien Dorier , Fabrizio Benedetti , Andrzej Stasiak

In these notes, I will sketch a new approach to Khovanov homology of knots and links based on counting the solutions of certain elliptic partial differential equations in four and five dimensions. The equations are formulated on four and…

Geometric Topology · Mathematics 2012-10-03 Edward Witten

This manuscript introduces a new framework for the study of knots by exploring the neighborhood of knot embeddings in the space of simple open and closed curves in 3-space. The latter gives rise to a knotoid spectrum, which determines the…

Geometric Topology · Mathematics 2024-10-22 Eleni Panagiotou

Data science offers a powerful tool to understand objects in multiple sciences. In this paper we utilize concept of data science, most notably topological data analysis, to extend our understanding of knot theory. This approach provides a…

Geometric Topology · Mathematics 2025-03-20 Pawel Dlotko , Davide Gurnari , Radmila Sazdanovic

This paper explores the problem of unknotting closed braids and classical knots in mathematical knot theory. We apply evolutionary computation methods to learn sequences of moves that simplify knot diagrams, and show that this can be…

Geometric Topology · Mathematics 2013-02-05 Nicholas Jackson , Colin G. Johnson

Knots are familiar entities that appear at a captivating nexus of art, technology, mathematics, and science. As topologically stable objects within field theories, they have been speculatively proposed as explanations for diverse persistent…

We extend knot contact homology to a theory over the ring $\mathbb{Z}[\lambda^{\pm 1},\mu^{\pm 1}]$, with the invariant given topologically and combinatorially. The improved invariant, which is defined for framed knots in $S^3$ and can be…

Geometric Topology · Mathematics 2008-06-11 Lenhard Ng
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