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Cosmic reionization is known to be a major phase transition of the gas in the Universe. Since astronomical objects formed in the early Universe, such as the first stars, galaxies and black holes, are expected to have caused cosmic…

Computational methods have reshaped the landscape of modern biology. While the biomedical community is increasingly dependent on computational tools, the mechanisms ensuring open data, open software, and reproducibility are variably…

Other Quantitative Biology · Quantitative Biology 2020-07-28 Jaqueline J. Brito , Jun Li , Jason H. Moore , Casey S. Greene , Nicole A. Nogoy , Lana X. Garmire , Serghei Mangul

Distributed digital infrastructures for computation and analytics are now evolving towards an interconnected ecosystem allowing complex applications to be executed from IoT Edge devices to the HPC Cloud (aka the Computing Continuum, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-06 Daniel Rosendo , Alexandru Costan , Gabriel Antoniu , Patrick Valduriez

We present several generative and predictive algorithms based on the RKHS (reproducing kernel Hilbert spaces) methodology, which, most importantly, are scale up efficiently with large datasets or high-dimensional data. It is well recognized…

Numerical Analysis · Mathematics 2024-12-12 Philippe G. LeFloch , Jean-Marc Mercier , Shohruh Miryusupov

Achieving sustainable, explainable, and maintainable automation for resource optimization is a core challenge across the edge-cloud continuum. Persistent overprovisioning and operational complexity often stem from heterogeneous platforms…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-17 Brian-Frederik Jahnke , René Brinkhege , Jan Peter Meyer , Daniel Tebernum , Falk Howar

With the recognized crisis of credibility in scientific research, there is a growth of reproducibility studies in computer science, and although existing surveys have reviewed reproducibility from various perspectives, especially very…

Software Engineering · Computer Science 2023-12-19 José Armando Hernández , Miguel Colom

In this paper we describe the development of a streamlined framework for large-scale ATLAS pMSSM reinterpretations of LHC Run-2 analyses using containerised computational workflows. The project is looking to assess the global coverage of…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-07 Marco Donadoni , Matthew Feickert , Lukas Heinrich , Yang Liu , Audrius Mečionis , Vladyslav Moisieienkov , Tibor Šimko , Giordon Stark , Marco Vidal García

Sequential Recommender Systems (SRSs) have emerged as a highly efficient approach to recommendation systems. By leveraging sequential data, SRSs can identify temporal patterns in user behaviour, significantly improving recommendation…

Replicating AI research is a crucial yet challenging task for large language model (LLM) agents. Existing approaches often struggle to generate executable code, primarily due to insufficient background knowledge and the limitations of…

Computation and Language · Computer Science 2026-04-21 Yujie Luo , Zhuoyun Yu , Xuehai Wang , Yuqi Zhu , Ningyu Zhang , Lanning Wei , Lun Du , Da Zheng , Huajun Chen

Climate science is critical for understanding both the causes and consequences of changes in global temperatures and has become imperative for decisive policy-making. However, climate science studies commonly require addressing complex…

Machine Learning · Computer Science 2020-09-23 Juan Carrillo , Daniel Garijo , Mark Crowley , Rober Carrillo , Yolanda Gil , Katherine Borda

The preservation of intangible cultural heritage is a critical challenge as collective memory fades over time. While Large Language Models (LLMs) offer a promising avenue for generating engaging narratives, their propensity for factual…

Artificial Intelligence · Computer Science 2026-04-06 Naga Sowjanya Barla , Jacopo de Berardinis

Large language models (LLMs) can generate code rapidly but remain unreliable for scientific algorithms whose correctness depends on structural assumptions rarely explicit in the source literature. We introduce a multi-stage LLM-assisted…

Computational Physics · Physics 2026-04-13 Yi Zhou

Online artificial intelligence (AI) algorithms are an important component of digital health interventions. These online algorithms are designed to continually learn and improve their performance as streaming data is collected on…

Computers and Society · Computer Science 2025-10-29 Susobhan Ghosh , Bhanu T. Gullapalli , Daiqi Gao , Asim Gazi , Anna Trella , Ziping Xu , Kelly Zhang , Susan A. Murphy

Modern radio telescopes will daily generate data sets on the scale of exabytes for systems like the Square Kilometre Array (SKA). Massive data sets are a source of unknown and rare astrophysical phenomena that lead to discoveries.…

Instrumentation and Methods for Astrophysics · Physics 2023-05-08 Steven Ndung'u , Trienko Grobler , Stefan J. Wijnholds , Dimka Karastoyanova , George Azzopardi

Evaluating knowledge systems (LLMs, RAG, knowledge graphs, etc) faces fundamental challenges: static benchmarks are vulnerable to contamination, LLM-based judges exhibit systematic biases, and ground truth extraction requires expensive…

Computation and Language · Computer Science 2026-01-16 JV Roig

The transition to agentic Root Cause Analysis (RCA) necessitates benchmarks that evaluate active reasoning rather than passive classification. However, current frameworks fail to reconcile ecological validity with reproducibility. We…

Software Engineering · Computer Science 2026-03-03 Yilun Wang , Guangba Yu , Haiyu Huang , Zirui Wang , Yujie Huang , Pengfei Chen , Michael R. Lyu

The growing resolution and volume of climate data from remote sensing and simulations pose significant storage, processing, and computational challenges. Traditional compression or subsampling methods often compromise data fidelity,…

Atmospheric and Oceanic Physics · Physics 2025-07-22 Aashish Panta , Amy Gooch , Giorgio Scorzelli , Michela Taufer , Valerio Pascucci

Simulating physical systems is a core component of scientific computing, encompassing a wide range of physical domains and applications. Recently, there has been a surge in data-driven methods to complement traditional numerical simulations…

Machine Learning · Computer Science 2021-08-19 Karl Otness , Arvi Gjoka , Joan Bruna , Daniele Panozzo , Benjamin Peherstorfer , Teseo Schneider , Denis Zorin

Magnetic resonance imaging (MRI) is a cornerstone of modern medical imaging. However, long image acquisition times, the need for qualitative expert analysis, and the lack of (and difficulty extracting) quantitative indicators that are…

Stochastic Reaction Networks (SRNs) are a fundamental modeling framework for systems ranging from chemical kinetics and epidemiology to ecological and synthetic biological processes. A central computational challenge is the estimation of…

Molecular Networks · Quantitative Biology 2025-12-09 Quentin Badolle , Arthur Theuer , Zhou Fang , Ankit Gupta , Mustafa Khammash
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