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Transparency and accountability have become major concerns for black-box machine learning (ML) models. Proper explanations for the model behavior increase model transparency and help researchers develop more accountable models. Graph neural…

Machine Learning · Computer Science 2023-05-09 Shichang Zhang , Jiani Zhang , Xiang Song , Soji Adeshina , Da Zheng , Christos Faloutsos , Yizhou Sun

While Knowledge Graphs (KGs) have become increasingly popular across various scientific disciplines for their ability to model and interlink huge quantities of data, essentially all real-world KGs are known to be incomplete. As such, with…

Machine Learning · Computer Science 2025-05-09 Jeffrey Seathrún Sardina

Graph neural networks have demonstrated state-of-the-art performance on knowledge graph tasks such as link prediction. However, interpreting GNN predictions remains a challenging open problem. While many GNN explainability methods have been…

Machine Learning · Computer Science 2025-06-17 Ryoji Kubo , Djellel Difallah

This paper studies the problem of predicting missing relationships between entities in knowledge graphs through learning their representations. Currently, the majority of existing link prediction models employ simple but intuitive scoring…

Computation and Language · Computer Science 2019-11-20 Xiang Kong , Xianyang Chen , Eduard Hovy

Knowledge graph embedding is a representation learning technique that projects entities and relations in a knowledge graph to continuous vector spaces. Embeddings have gained a lot of uptake and have been heavily used in link prediction and…

Artificial Intelligence · Computer Science 2022-07-14 Jan Portisch , Heiko Paulheim

Learning low-dimensional embeddings of knowledge graphs is a powerful approach used to predict unobserved or missing edges between entities. However, an open challenge in this area is developing techniques that can go beyond simple edge…

Social and Information Networks · Computer Science 2019-10-30 William L. Hamilton , Payal Bajaj , Marinka Zitnik , Dan Jurafsky , Jure Leskovec

Link prediction (LP) is crucial for Knowledge Graphs (KG) completion but commonly suffers from interpretability issues. While several methods have been proposed to explain embedding-based LP models, they are generally limited to local…

Artificial Intelligence · Computer Science 2024-12-09 Ye Sun , Lei Shi , Yongxin Tong

Knowledge graph (KG) reasoning is becoming increasingly popular in both academia and industry. Conventional KG reasoning based on symbolic logic is deterministic, with reasoning results being explainable, while modern embedding-based…

Artificial Intelligence · Computer Science 2022-02-16 Wen Zhang , Jiaoyan Chen , Juan Li , Zezhong Xu , Jeff Z. Pan , Huajun Chen

The ability of knowledge graphs to represent complex relationships at scale has led to their adoption for various needs including knowledge representation, question-answering, and recommendation systems. Knowledge graphs are often…

Computation and Language · Computer Science 2023-05-18 Jason Youn , Ilias Tagkopoulos

Discovery gene-disease links is important in biology and medicine areas, enabling disease identification and drug repurposing. Machine learning approaches accelerate this process by leveraging biological knowledge represented in ontologies…

Machine Learning · Computer Science 2025-04-14 Catarina Canastra , Cátia Pesquita

Since large knowledge bases are typically incomplete, missing facts need to be inferred from observed facts in a task called knowledge base completion. The most successful approaches to this task have typically explored explicit paths…

Artificial Intelligence · Computer Science 2018-04-24 Yelong Shen , Po-Sen Huang , Ming-Wei Chang , Jianfeng Gao

Reasoning paths are reliable information in knowledge graph completion (KGC) in which algorithms can find strong clues of the actual relation between entities. However, in real-world applications, it is difficult to guarantee that…

Information Retrieval · Computer Science 2025-10-08 Yanning Hou , Sihang Zhou , Ke Liang , Lingyuan Meng , Xiaoshu Chen , Ke Xu , Siwei Wang , Xinwang Liu , Jian Huang

We focus our attention on the link prediction problem for knowledge graphs, which is treated herein as a binary classification task on neural embeddings of the entities. By comparing, combining and extending different methodologies for link…

Artificial Intelligence · Computer Science 2018-07-30 Asan Agibetov , Matthias Samwald

In this work, we take a closer look at the evaluation of two families of methods for enriching information from knowledge graphs: Link Prediction and Entity Alignment. In the current experimental setting, multiple different scores are…

Machine Learning · Computer Science 2023-09-21 Max Berrendorf , Evgeniy Faerman , Laurent Vermue , Volker Tresp

Recently, link prediction has attracted more attentions from various disciplines such as computer science, bioinformatics and economics. In this problem, unknown links between nodes are discovered based on numerous information such as…

Social and Information Networks · Computer Science 2018-07-30 Mohammad Mehdi Keikha , Maseud Rahgozar , Masoud Asadpour

The explication and the generation of explanations are prominent topics in artificial intelligence and data science, in order to make methods and systems more transparent and understandable for humans. This paper investigates the problem of…

Artificial Intelligence · Computer Science 2019-09-10 Martin Atzmueller , Cicek Güven , Dietmar Seipel

Reasoning on knowledge graphs is a challenging task because it utilizes observed information to predict the missing one. Particularly, answering complex queries based on first-order logic is one of the crucial tasks to verify learning to…

Artificial Intelligence · Computer Science 2024-10-23 Hang Yin , Zihao Wang , Yangqiu Song

Graph neural networks are prominent models for representation learning over graph-structured data. While the capabilities and limitations of these models are well-understood for simple graphs, our understanding remains incomplete in the…

Machine Learning · Computer Science 2023-10-27 Xingyue Huang , Miguel Romero Orth , İsmail İlkan Ceylan , Pablo Barceló

This paper studies learning logic rules for reasoning on knowledge graphs. Logic rules provide interpretable explanations when used for prediction as well as being able to generalize to other tasks, and hence are critical to learn. Existing…

Artificial Intelligence · Computer Science 2021-07-19 Meng Qu , Junkun Chen , Louis-Pascal Xhonneux , Yoshua Bengio , Jian Tang

Predicting missing links between entities in a knowledge graph is a fundamental task to deal with the incompleteness of data on the Web. Knowledge graph embeddings map nodes into a vector space to predict new links, scoring them according…

Artificial Intelligence · Computer Science 2023-02-14 Cosimo Gregucci , Mojtaba Nayyeri , Daniel Hernández , Steffen Staab