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While natural language processing (NLP) of unstructured clinical narratives holds the potential for patient care and clinical research, portability of NLP approaches across multiple sites remains a major challenge. This study investigated…

This study reviewed the use of Large Language Models (LLMs) in healthcare, focusing on their training corpora, customization techniques, and evaluation metrics. A systematic search of studies from 2021 to 2024 identified 61 articles. Four…

Computation and Language · Computer Science 2025-02-18 Shuqi Yang , Mingrui Jing , Shuai Wang , Jiaxin Kou , Manfei Shi , Weijie Xing , Yan Hu , Zheng Zhu

Electronic medical records (EMRs) contain the majority of patients' healthcare details. It is an abundant resource for developing an automatic healthcare system. Most of the natural language processing (NLP) studies on EMR processing, such…

Computation and Language · Computer Science 2024-10-01 Hongyi Yuan , Sheng Yu

Since the invention of computers, communication through natural language (actual human language) has been a dream technology. However, natural language is extremely difficult to mathematically formulate, making it difficult to realize as an…

Computation and Language · Computer Science 2023-10-11 Masahiro Yamamoto

Ethical frameworks for the use of natural language processing (NLP) are urgently needed to shape how large language models (LLMs) and similar tools are used for healthcare applications. Healthcare faces existing challenges including the…

Computation and Language · Computer Science 2024-01-25 Maria Antoniak , Aakanksha Naik , Carla S. Alvarado , Lucy Lu Wang , Irene Y. Chen

State-of-the-art solutions for Natural Language Processing (NLP) are able to capture a broad range of contexts, like the sentence-level context or document-level context for short documents. But these solutions are still struggling when it…

Cardiovascular diseases are becoming increasingly prevalent in modern society, with a profound impact on global health and well-being. These Cardiovascular disorders are complex and multifactorial, influenced by genetic predispositions,…

Computation and Language · Computer Science 2025-10-23 Kailai Yang , Yan Leng , Xin Zhang , Tianlin Zhang , Paul Thompson , Bernard Keavney , Maciej Tomaszewski , Sophia Ananiadou

Objective: To automatically create large labeled training datasets and reduce the efforts of feature engineering for training accurate machine learning models for clinical information extraction. Materials and Methods: We propose a distant…

Information Retrieval · Computer Science 2018-04-24 Yanshan Wang , Sunghwan Sohn , Sijia Liu , Feichen Shen , Liwei Wang , Elizabeth J. Atkinson , Shreyasee Amin , Hongfang Liu

Biomedical Information Extraction is an exciting field at the crossroads of Natural Language Processing, Biology and Medicine. It encompasses a variety of different tasks that require application of state-of-the-art NLP techniques, such as…

Computation and Language · Computer Science 2017-05-17 Surag Nair

Over recent years, an increasing amount of compute and data has been poured into training large language models (LLMs), usually by doing one-pass learning on as many tokens as possible randomly selected from large-scale web corpora. While…

Computation and Language · Computer Science 2023-08-24 Kushal Tirumala , Daniel Simig , Armen Aghajanyan , Ari S. Morcos

Developing explainability methods for Natural Language Processing (NLP) models is a challenging task, for two main reasons. First, the high dimensionality of the data (large number of tokens) results in low coverage and in turn small…

Computation and Language · Computer Science 2023-03-08 Peyman Jalali , Nengfeng Zhou , Yufei Yu

Generative Large Language Models (LLMs) hold significant promise in healthcare, demonstrating capabilities such as passing medical licensing exams and providing clinical knowledge. However, their current use as information retrieval tools…

Smart healthcare has achieved significant progress in recent years. Emerging artificial intelligence (AI) technologies enable various smart applications across various healthcare scenarios. As an essential technology powered by AI, natural…

Computation and Language · Computer Science 2023-03-23 Binggui Zhou , Guanghua Yang , Zheng Shi , Shaodan Ma

Data Cleaning refers to the process of detecting and fixing errors in the data. Human involvement is instrumental at several stages of this process, e.g., to identify and repair errors, to validate computed repairs, etc. There is currently…

Databases · Computer Science 2018-01-03 El Kindi Rezig , Mourad Ouzzani , Ahmed K. Elmagarmid , Walid G. Aref

Natural Language Processing (NLP) has emerged as a crucial technology for understanding and generating human language, playing an essential role in tasks such as machine translation, sentiment analysis, and more pertinently, question…

Computation and Language · Computer Science 2023-10-31 Sanad Aburass , Osama Dorgham , Maha Abu Rumman

The adoption of Deep Neural Networks (DNNs) has greatly benefited Natural Language Processing (NLP) during the past decade. However, the demands of long document analysis are quite different from those of shorter texts, while the ever…

Computation and Language · Computer Science 2024-03-18 Dimitrios Tsirmpas , Ioannis Gkionis , Georgios Th. Papadopoulos , Ioannis Mademlis

Language documentation is inherently a time-intensive process; transcription, glossing, and corpus management consume a significant portion of documentary linguists' work. Advances in natural language processing can help to accelerate this…

Computation and Language · Computer Science 2018-12-14 Graham Neubig , Patrick Littell , Chian-Yu Chen , Jean Lee , Zirui Li , Yu-Hsiang Lin , Yuyan Zhang

Parallel texts are a relatively rare language resource, however, they constitute a very useful research material with a wide range of applications. This study presents and analyses new methodologies we developed for obtaining such data from…

Computation and Language · Computer Science 2016-03-23 Krzysztof Wołk , Emilia Rejmund , Krzysztof Marasek

Clinical oncology generates vast, unstructured data that often contain inconsistencies, missing information, and ambiguities, making it difficult to extract reliable insights for data-driven decision-making. General-purpose large language…

Computation and Language · Computer Science 2025-03-12 Morteza Rohanian , Tarun Mehra , Nicola Miglino , Farhad Nooralahzadeh , Michael Krauthammer , Andreas Wicki

With the rapid development of precision medicine, a large amount of health data (such as electronic health records, gene sequencing, medical images, etc.) has been produced. It encourages more and more interest in data-driven insight…

Computation and Language · Computer Science 2019-12-10 Sendong Zhao , Fei Wang