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Existing methods for multi-agent navigation typically assume fully known environments, offering limited support for partially known scenarios with outdated or imperfect prior maps, such as warehouses or factory floors. There, agents need to…

Biological signaling is imagined as a combination of activation and transport. The former is triggered by local molecular interactions and the latter is the result of molecular diffusion. However, other fundamental physical principles of…

Biological Physics · Physics 2016-12-07 Bernhard Fichtl , Matthias F. Schneider

We present a method based on a time domain simulation of wave propagation that allows studying the optical response of a broad range of dielectric photonic structures. This method is particularly suitable for dealing with complex biological…

Computational Physics · Physics 2013-01-07 Andrés E. Dolinko , Diana C. Skigin

A robotic swarm that is required to operate for long periods in a potentially unknown environment can use both evolution and individual learning methods in order to adapt. However, the role played by the environment in influencing the…

Neural and Evolutionary Computing · Computer Science 2018-04-23 Andreas Steyven , Emma Hart , Ben Paechter

In complex environments, there are costs to both ignorance and perception. An organism needs to track fitness-relevant information about its world, but the more information it tracks, the more resources it must devote to memory and…

Neurons and Cognition · Quantitative Biology 2018-10-17 Sarah E. Marzen , Simon DeDeo

In mathematical modeling, several different functional forms can often be used to fit a data set equally well, especially if the data is sparse. In such cases, these mathematically different but similar looking functional forms are…

Dynamical Systems · Mathematics 2022-08-08 Sarah K. Wyse , Maria M. Martignoni , May Anne Mata , Eric Foxall , Rebecca C. Tyson

We present a benchmark study of autonomous, chemical agents exhibiting associative learning of an environmental feature. Associative learning has been widely studied in cognitive science and artificial intelligence, but are most commonly…

Adaptation and Self-Organizing Systems · Physics 2022-10-12 Stuart Bartlett , David Louapre

In several natural and engineering systems, changes in control parameters can trigger bifurcations that lead to sustained or growing periodic oscillations, indicating the onset of oscillatory instabilities. Such emergent behaviour often…

Fluid Dynamics · Physics 2026-03-26 Rohit Radhakrishnan , Prasana Kumar , Induja Pavithran , R. I. Sujith

Cell sensory transcription networks are the intracellular computation structure that regulates and drives cellular activity. Activity in these networks determines the the cell's ability to adapt to changes in its environment. Resilient…

Molecular Networks · Quantitative Biology 2025-05-21 Charles A. Johnson , Keon Ho , Park , Enoch Yeung

The nervous system represents time-dependent signals in sequences of discrete action potentials or spikes, all spikes are identical so that information is carried only in the spike arrival times. We show how to quantify this information, in…

Condensed Matter · Physics 2008-02-03 S. P. Strong , Roland Koberle , Rob R. de Ruyter van Steveninck , William Bialek

Biological information processing manifests a huge variety in its complexity and capability among different organisms, which presumably stems from the evolutionary optimization under limited computational resources. Starting from the…

Biological Physics · Physics 2025-10-21 Takehiro Tottori , Tetsuya J. Kobayashi

The transport of individual entities through interconnected structures is a process of practical relevance both in biology and technology. Examples are given by diffusive dynamics of molecules in porous structures. In soft environments,…

Soft Condensed Matter · Physics 2026-02-09 Jakob Mihatsch , Andreas M. Menzel

The behavior of living systems is based on the experience they gained through their interactions with the environment [1]. This experience is stored in the complex biochemical networks of cells and organisms to provide a relationship…

Soft Condensed Matter · Physics 2022-02-14 Santiago Muiños-Landin , Keyan Ghazi-Zahedi , Frank Cichos

Recent progress in diverse intelligence has shown simple learning capacities below the organism level - single cells and even molecular networks. However, there are still many knowledge gaps around learning capacity above the organism…

Populations and Evolution · Quantitative Biology 2026-05-29 Adrita Samanta , Hananel Hazan , Michael Levin

Pinnipeds like seals and sea lions use their whiskers in hunting their prey in dark and turbid conditions. There is no theoretical model or a hypothesis to explain the interaction of whiskers with hydrodynamic fish trails. The present work…

Fluid Dynamics · Physics 2018-12-24 Muthukumar Muthuramalingam , Christoph Bruecker

We present a spatially-extended system of chemical reactions exhibiting adaptation to time-dependent influxes of reactants. Here adaptation is defined as improved reproductive success, namely the ability of one of the many locally stable…

Statistical Mechanics · Physics 2025-12-02 Olivier Rivoire , Guy Bunin

Animals use a combination of egocentric navigation driven by the internal integration of environmental cues, interspersed with geocentric course correction and reorientation, often with uncertainty in sensory acquisition of information,…

Biological Physics · Physics 2015-12-22 O. Peleg , L. Mahadevan

Planktonic organisms, despite their passive drift in the ocean, exhibit complex responses to fluid flow, including escape behaviors and larval settlement detection. But what flow signals can they perceive? This paper addresses this question…

Fluid Dynamics · Physics 2024-11-27 Christophe Eloy

Biological systems, from cells to organisms, must respond to the ever changing environment in order to survive and function. This is not a simple task given the often random nature of the signals they receive, as well as the intrinsically…

Quantitative Methods · Quantitative Biology 2015-07-09 Aleksandra M. Walczak

A large number of biological systems - from bacteria to sheep - can be described as ensembles of self-propelled agents (active particles) with a complex internal dynamic that controls the agent's behavior: resting, moving slow, moving fast,…

Biological Physics · Physics 2021-09-03 L. Gómez-Nava , T. Goudon , F. Peruani
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