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Graph Edit Distance (GED) is a fundamental, albeit NP-hard, metric for structural graph similarity. Recent neural graph matching architectures approximate GED by first encoding graphs with a Graph Neural Network (GNN) and then applying…

Machine Learning · Computer Science 2026-05-08 Jyotirmaya Shivottam , Subhankar Mishra

Real-world networks exhibit universal structural properties such as sparsity, small-worldness, heterogeneous degree distributions, high clustering, and community structures. Geometric network models, particularly Random Hyperbolic Graphs…

Social and Information Networks · Computer Science 2025-06-04 Stefano Guarino , Davide Torre , Enrico Mastrostefano

Real networks often grow through the sequential addition of new nodes that connect to older ones in the graph. However, many real systems evolve through the branching of fundamental units, whether those be scientific fields, countries, or…

Physics and Society · Physics 2020-06-30 Muhua Zheng , Guillermo García-Pérez , Marián Boguñá , M. Ángeles Serrano

Brain networks exhibit remarkable structural properties, including high local clustering, short path lengths, and heavy-tailed weight and degree distributions. While these features are thought to enable efficient information processing with…

Biological Physics · Physics 2026-01-09 Aitor Morales-Gregorio , Anno C. Kurth , Karolína Korvasová

The last decade has witnessed an experimental revolution in data science and machine learning, epitomised by deep learning methods. Indeed, many high-dimensional learning tasks previously thought to be beyond reach -- such as computer…

Machine Learning · Computer Science 2021-05-04 Michael M. Bronstein , Joan Bruna , Taco Cohen , Petar Veličković

Graph generation is a crucial task in many fields, including network science and bioinformatics, as it enables the creation of synthetic graphs that mimic the properties of real-world networks for various applications. Graph Generative…

Machine Learning · Computer Science 2026-01-21 Salvatore Romano , Marco Grassia , Giuseppe Mangioni

Many real networks are embedded in space, where in some of them the links length decay as a power law distribution with distance. Indications that such systems can be characterized by the concept of dimension were found recently. Here, we…

Physics and Society · Physics 2015-06-05 Thorsten Emmerich , Armin Bunde , Shlomo Havlin , Li Guanlian , Li Daqing

Inference of new biological knowledge, e.g., prediction of protein function, from protein-protein interaction (PPI) networks has received attention in the post-genomic era. A popular strategy has been to cluster the network into…

Molecular Networks · Quantitative Biology 2012-04-11 Ryan W. Solava , Ryan P. Michaels , Tijana Milenkovic

For every $r \in \mathbb{N}$, let $\theta_r$ denote the graph with two vertices and $r$ parallel edges. The $\theta_r$-girth of a graph $G$ is the minimum number of edges of a subgraph of $G$ that can be contracted to $\theta_r$. This…

Combinatorics · Mathematics 2017-01-19 Dimitris Chatzidimitriou , Jean-Florent Raymond , Ignasi Sau , Dimitrios M. Thilikos

Gromov-Wasserstein (GW) distance is a powerful tool for comparing and aligning probability distributions supported on different metric spaces. Recently, GW has become the main modeling technique for aligning heterogeneous data for a wide…

Machine Learning · Computer Science 2023-10-31 Lemin Kong , Jiajin Li , Jianheng Tang , Anthony Man-Cho So

In many real world datasets arising from social networks, there are hidden higher order relations among data points which cannot be captured using graph modeling. It is natural to use a more general notion of hypergraphs to model such…

Machine Learning · Computer Science 2020-10-05 Dong Quan Ngoc Nguyen , Lin Xing

The correlation matrix is a central representation of functional brain networks in neuroimaging. Traditional analyses often treat pairwise interactions independently in a Euclidean setting, overlooking the intrinsic geometry of correlation…

Machine Learning · Statistics 2025-04-10 Kisung You , Yelim Lee , Hae-Jeong Park

We introduce a new generative approach for synthesizing 3D geometry and images from single-view collections. Most existing approaches predict volumetric density to render multi-view consistent images. By employing volumetric rendering using…

Computer Vision and Pattern Recognition · Computer Science 2024-06-17 Salvatore Esposito , Qingshan Xu , Kacper Kania , Charlie Hewitt , Octave Mariotti , Lohit Petikam , Julien Valentin , Arno Onken , Oisin Mac Aodha

Analogous to biological sequence comparison, comparing cellular networks is an important problem that could provide insight into biological understanding and therapeutics. For technical reasons, comparing large networks is computationally…

Molecular Networks · Quantitative Biology 2009-01-30 Natasa Przulj

We present a general class of geometric network growth mechanisms by homogeneous attachment in which the links created at a given time $t$ are distributed homogeneously between a new node and the exising nodes selected uniformly. This is…

Physics and Society · Physics 2018-03-28 Charles Murphy , Antoine Allard , Edward Laurence , Guillaume St-Onge , Louis J. Dubé

A wealth of evidence shows that real world networks are endowed with the small-world property i.e., that the maximal distance between any two of their nodes scales logarithmically rather than linearly with their size. In addition, most…

Euclidean Steiner trees are relevant to model minimal networks in real-world applications ubiquitously. In this paper, we study the feasibility of a hierarchical approach embedded with bundling operations to compute multiple and mutually…

Artificial Intelligence · Computer Science 2024-12-03 Victor Parque

A graph G is c-closed if every two vertices with at least c common neighbors are adjacent to each other. Introduced by Fox, Roughgarden, Seshadhri, Wei and Wein [ICALP 2018, SICOMP 2020], this definition is an abstraction of the triadic…

Data Structures and Algorithms · Computer Science 2025-04-04 Tom Davot , Jessica Enright , Jayakrishnan Madathil , Kitty Meeks

We propose a new distribution-free model of social networks. Our definitions are motivated by one of the most universal signatures of social networks, triadic closure---the property that pairs of vertices with common neighbors tend to be…

Combinatorics · Mathematics 2018-04-26 Jacob Fox , Tim Roughgarden , C. Seshadhri , Fan Wei , Nicole Wein

In this paper, we are interested in the mixing behaviour of simple random walks on inhomogeneous directed graphs. We focus our study on the Chung-Lu digraph, which is an inhomogeneous network that generalizes the Erd\H{o}s-R\'enyi digraph.…

Probability · Mathematics 2024-09-25 Alessandra Bianchi , Giacomo Passuello