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Related papers: The surface tension of Martini 3 water mixtures

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The Martini model, a coarse-grained force field initially developed with biomolecular simulations in mind, has found an increasing number of applications in the field of soft materials science. The model's underlying building block…

Materials Science · Physics 2020-12-15 Riccardo Alessandri , Fabian Grünewald , Siewert J. Marrink

The Martini 3 force field is a full re-parametrization of the Martini coarse-grained model for biomolecular simulations. Due to the improved interaction balance it allows for more accurate description of condensed phase systems. In the…

We report on a molecular dynamics investigation of the wetting properties of graphitic surfaces by various solutions at concentrations 1-8 wt% of commercially available non-ionic surfactants with long hydrophilic chains, linear or T-shaped.…

Chemical Physics · Physics 2012-09-12 Danilo Sergi , Giulio Scocchi , Alberto Ortona

Among other improvements, the Martini 3 coarse-grained force field provides a more accurate description of the solvation of protein pockets and channels through the consistent use of various bead types and sizes. Here, we show that the…

Soft Condensed Matter · Physics 2022-07-27 Balázs Fábián , Sebastian Thallmair , Gerhard Hummer

Polysaccharides (carbohydrates) are key regulators of a large number of cell biological processes. However, precise biochemical or genetic manipulation of these often complex structures is laborious and hampers experimental…

MARTINI is a popular coarse-grained force-field that is mainly used in molecular dynamics (MD) simulations. It is based on the ``Lego'' approach where intermolecular interactions between coarse-grained beads representing chemical units of…

Computational Physics · Physics 2024-06-25 Luis H. Carnevale , Panagiotis E. Theodorakis

Coarse-graining (CG) reduces molecular details to extend the time and length scales of molecular dynamics simulations to microseconds and micrometers. However, the CG approaches have long been limited by the difficulty of constructing both…

Chemical Physics · Physics 2026-05-06 Kevin V. Bigting , Shubhadeep Nag , Yaxin An

We study a three-dimensional system of self-propelled Brownian particles interacting via the Lennard-Jones potential. Using Brownian Dynamics simulations in an elongated simulation box, we investigate the steady states of vapour-liquid…

Soft Condensed Matter · Physics 2017-08-29 Siddharth Paliwal , Vasileios Prymidis , Laura Filion , Marjolein Dijkstra

Molecular models of real fluids are validated by comparing the vapor-liquid surface tension from molecular dynamics (MD) simulation to correlations of experimental data. The considered molecular models consist of up to 28 interaction sites,…

Computational Physics · Physics 2016-08-16 Stephan Werth , Martin Horsch , Hans Hasse

A model for the formation of cavitation nuclei in liquids has recently been presented with basis in interfacial liquid tension at non-planar solid surfaces of concave form. In the present paper investigations of water-solid interfaces by…

Fluid Dynamics · Physics 2007-05-23 Niels Asger Mortensen , Anders Kuhle , Knud A. Morch

We report here on the pitfalls of the simulation model introduced in the "Capturing Phase Behavior of Ternary Lipid Mixtures with a Refined Martini Coarse-Grained Force Field" [Journal of Chemical Theory and Computation 2018, 14, 11,…

Biological Physics · Physics 2020-09-17 Matti Javanainen , Balazs Fabian , Hector Martinez-Seara

We propose a novel three-way coupling method to model the contact interaction between solid and fluid driven by strong surface tension. At the heart of our physical model is a thin liquid membrane that simultaneously couples to both the…

Fluid Dynamics · Physics 2021-05-19 Liangwang Ruan , Jinyuan Liu , Bo Zhu , Shinjiro Sueda , Bin Wang , Baoquan Chen

Many-body dissipative particle dynamics (MDPD) offers a significant speed-up in the simulation of various systems, including soft matter, in comparison with molecular dynamics (MD) simulations based on Lennard-Jones nteractions, which is…

Soft Condensed Matter · Physics 2025-06-09 Natalia Kramarz , Luís H. Carnevale , Panagiotis E. Theodorakis

We have given theoretical expressions for the forces exerted on a quasi-2D flat and smooth solid plate immersed into a liquid pool of a simple liquid. All forces given by the theory, the local forces on the top, the contact line and the…

Chemical Physics · Physics 2020-08-26 Yuta Imaizumi , Takeshi Omori , Hiroki Kusudo , Carlos Bistafa , Yasutaka Yamaguchi

The surface tension of monolayers with mixtures of anionic and nonionic surfactant at the liquid/vapour interface is studied. Previous works have observed that calculations of the surface tension of simple fluids show artificial…

The sodium dodecyl sulfate (SDS) surfactant is widely used in various applications, such as household products (e.g., shampoos, toothpaste, detergents, and cleaning products) and food manufacturing (e.g., emulsifiers). To investigate its…

Soft Condensed Matter · Physics 2026-04-16 Luís H. Carnevale , Gabriela Niechwiadowicz , Panagiotis E. Theodorakis

We have developed a coarse-grained (CG) model of a polymer-clay system consisting of organically modified montmorillonite nanoclay as the nanoparticle in accordance with the MARTINI forcefield. We have used mechanical properties and…

Soft Condensed Matter · Physics 2019-07-16 Parvez khan , Gaurav Goel

We investigate the properties of membranes under tension by Monte-Carlo simulations of a generic coarse-grained model for lipid bilayers. We give a comprising overview of the behavior of several membrane characteristics, such as the area…

Biological Physics · Physics 2010-03-17 Jörg Neder , Beate West , Peter Nielaba , Friederike Schmid

By means of extensive equilibrium molecular dynamics simulations we have investigated, the behavior of the interfacial tension $\gamma$ of two immiscible symmetrical Lennard-Jones fluids. This quantity is studied as function of reduced…

Statistical Mechanics · Physics 2016-08-15 Enrique Diaz-Herrera , José Alejandre , Guillermo Ramírez-Santiago , F. Forstmann

A novel mechanical approach is developed to explore by means of atom-scale simulation the concept of line tension at a solid-liquid-vapor contact line as well as its dependence on temperature, confinement, and solid/fluid interactions. More…

Mesoscale and Nanoscale Physics · Physics 2020-03-18 Romain Bey , Benoit Coasne , Cyril Picard
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