Related papers: An Analysis of Performance Bottlenecks in MRI Pre-…

Deep neural networks achieve state-of-the-art results for accelerated MRI reconstruction. Most research on deep learning based imaging focuses on improving neural network architectures trained and evaluated on fixed and homogeneous training…

IoT Edge intelligence requires Convolutional Neural Network (CNN) inference to take place in the edge devices itself. ARM big.LITTLE architecture is at the heart of prevalent commercial edge devices. It comprises of single-ISA heterogeneous…

Retrieval systems are increasingly used in biomedical and clinical natural language processing applications, yet practical guidance for researchers building such systems is limited. In this work, we provide such guidance through an…

Brain MRI segmentation results should always undergo a quality control (QC) process, since automatic segmentation tools can be prone to errors. In this work, we propose two deep learning-based architectures for performing QC automatically.…

Determining a process-structure-property relationship is the holy grail of materials science, where both computational prediction in the forward direction and materials design in the inverse direction are essential. Problems in materials…

Machine learning (ML) pipeline composition and optimisation have been studied to seek multi-stage ML models, i.e. preprocessor-inclusive, that are both valid and well-performing. These processes typically require the design and traversal of…

In the twilight of Moore's law, GPUs and other specialized hardware accelerators have dramatically sped up neural network training. However, earlier stages of the training pipeline, such as disk I/O and data preprocessing, do not run on…

Designing a robotic system that functions effectively within the specific environment of a Magnetic Resonance Imaging (MRI) scanner requires solving numerous technical issues, such as maintaining the robot's precision and stability under…

Pipelining is a design technique for logical circuits that allows for higher throughput than circuits in which multiple computations are fed through the system one after the other. It allows for much faster computation than architectures in…

Python's flexibility and ease of use come at the cost of performance inefficiencies, requiring developers to rely on profilers to optimize execution. SCALENE, a high-performance CPU, GPU, and memory profiler, provides fine-grained insights…

Magnetic resonance imaging (MRI) is one of the noninvasive imaging modalities that can produce high-quality images. However, the scan procedure is relatively slow, which causes patient discomfort and motion artifacts in images. Accelerating…

There is a growing interest in portable MRI (pMRI) systems for point-of-care imaging, particularly in remote or resource-constrained environments. However, the computational complexity of pMRI, especially in image reconstruction and machine…

Proper quality control (QC) is time consuming when working with large-scale medical imaging datasets, yet necessary, as poor-quality data can lead to erroneous conclusions or poorly trained machine learning models. Most efforts to reduce…

In modern computer architectures, the performance of many memory-bound workloads (e.g., machine learning, graph processing, databases) is limited by the data movement bottleneck that emerges when transferring large amounts of data between…

Magnetic Resonance Imaging (MRI) plays a vital role in diagnosis, management and monitoring of many diseases. However, it is an inherently slow imaging technique. Over the last 20 years, parallel imaging, temporal encoding and compressed…

The task of MRI fingerprinting is to identify tissue parameters from complex-valued MRI signals. The prevalent approach is dictionary based, where a test MRI signal is compared to stored MRI signals with known tissue parameters and the most…

The study of neurocognitive tasks requiring accurate localisation of activity often rely on functional Magnetic Resonance Imaging, a widely adopted technique that makes use of a pipeline of data processing modules, each involving a variety…

FMRI data are noisy, complicated to acquire, and typically go through many steps of processing before they are used in a study or clinical practice. Being able to visualize and understand the data from the start through the completion of…

The main disadvantage of Magnetic Resonance Imaging (MRI) are its long scan times and, in consequence, its sensitivity to motion. Exploiting the complementary information from multiple receive coils, parallel imaging is able to recover…

Machine Reading at Scale (MRS) is a challenging task in which a system is given an input query and is asked to produce a precise output by "reading" information from a large knowledge base. The task has gained popularity with its natural…