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Movement is a fundamental behaviour of organisms that brings about beneficial encounters with resources and mates, but at the same time exposes the organism to dangerous encounters with predators. The movement patterns adopted by organisms…

Populations and Evolution · Quantitative Biology 2014-03-26 Giuseppe Bianco , Patrizio Mariani , Andre W. Visser , Maria Grazia Mazzocchi , Simone Pigolotti

The dynamics of human mobility characterizes the trajectories humans follow during their daily activities and is the foundation of processes from epidemic spreading to traffic prediction and information recommendation. In this paper, we…

Physics and Society · Physics 2015-06-16 Zhi-Dan Zhao , Shi-Min Cai , Yang Lu

Microorganisms often encounter strong confinement and complex hydrodynamic flows while navigating their habitats. Combining finite-element methods and stochastic simulations, we study the interplay of active transport and heterogeneous…

Soft Condensed Matter · Physics 2025-11-05 Pallabi Das , Mirko Residori , Axel Voigt , Suvendu Mandal , Christina Kurzthaler

Many wild species affected by human activities require multiple surveys with differing designs to capture behavioural response to wide ranging habitat conditions and map and quantify them. While data from for example intersecting but…

We study the spatial patterns formed by a system of interacting particles where the mobility of any individual is determined by the population crowding at two different spatial scales. In this way we model the behavior of some biological…

Statistical Mechanics · Physics 2015-07-08 Ricardo Martínez-García , Clara Murgui , Emilio Hernández-García , Cristóbal López

A key question in brain sciences is how to identify time-evolving functional connectivity, such as that obtained from recordings of neuronal activity over time. We wish to explain the observed phenomena in terms of latent states which, in…

Methodology · Statistics 2026-05-14 Yiwei Gong , Susanna B. Mierau , Sinead A. Williamson

The analysis of animal tracking data provides an important source of scientific understanding and discovery in ecology. Observations of animal trajectories using telemetry devices provide researchers with information about the way animals…

Methodology · Statistics 2020-02-17 Henry R. Scharf , Mevin B. Hooten , Ryan R. Wilson , George M. Durner , Todd C. Atwood

Human visual perception is a complex, dynamic and fluctuating process. In addition to the incoming visual stimulus, it is affected by many other factors including temporal context, both external and internal to the observer. In this study…

Neurons and Cognition · Quantitative Biology 2020-07-01 Urit Gordon , Shimon Marom , Naama Brenner

The structure and degree of order in soft matter and other materials is intimately connected to the nature of the interactions between the particles. One important research goal is to find suitable control mechanisms, to enhance or suppress…

Soft Condensed Matter · Physics 2020-09-16 A. Scacchi , M. G. Mazza , A. J. Archer

The richness of many complex systems stems from the interactions among their components. The higher-order nature of these interactions, involving many units at once, and their temporal dynamics constitute crucial properties that shape the…

Physics and Society · Physics 2024-07-29 Marco Mancastroppa , Iacopo Iacopini , Giovanni Petri , Alain Barrat

We analytically study the dynamics of evolving populations that exhibit metastability on the level of phenotype or fitness. In constant selective environments, such metastable behavior is caused by two qualitatively different mechanisms.…

adap-org · Physics 2007-05-23 Erik van Nimwegen , James P. Crutchfield

Navigating through a visual maze relies on the strategic use of eye movements to select and identify the route. When navigating the maze, there are trade-offs between exploring to the environment and relying on memory. This study examined…

Computer Vision and Pattern Recognition · Computer Science 2013-07-23 Min Zhao , Andre G. Marquez

Marine microorganisms must cope with complex flow patterns and even turbulence as they navigate the ocean. To survive they must avoid predation and find efficient energy sources. A major difficulty in analysing possible survival strategies…

Fluid Dynamics · Physics 2022-11-29 J. Qiu , N. Mousavi , K. Gustavsson , C. Xu , B. Mehlig , L. Zhao

We developed a simulated environment to train deep reinforcement learning agents on a shortcut usage navigation task, motivated by the Dual Solutions Paradigm test used for human navigators. We manipulated the frequency with which agents…

Machine Learning · Computer Science 2025-03-20 Andrew Liu , Alla Borisyuk

The exceptional reactivity of animal collectives to predatory attacks is thought to be due to rapid, but local, transfer of information between group members. These groups turn together in unison and produce escape waves. However, it is not…

Populations and Evolution · Quantitative Biology 2015-06-05 James Herbert-Read , Jerome Buhl , Feng Hu , Ashley Ward , David Sumpter

While moving, animals must frequently make decisions about their future travel direction, whether they are alone or in a group. Here we investigate this process for zebrafish (Danio rerio), which naturally move in cohesive groups. Employing…

Biological Physics · Physics 2023-05-09 Lital Oscar , Liang Li , Dan Gorbonos , Iain D. Couzin , Nir S. Gov

Axonal growth and guidance at the ventral floor plate is here followed $\textit{in vivo}$ in real time at high resolution by light-sheet microscopy along several hundred micrometers of the zebrafish spinal cord. The recordings show the…

Neurons and Cognition · Quantitative Biology 2021-07-13 Søren S. L. Andersen

Recent studies show differences in individual motion and shoaling tendency between strains of the same species. Here, we analyse the collective motion and the response to visual stimuli in two morphologically different strains (TL and AB)…

Quantitative Methods · Quantitative Biology 2017-01-12 Axel Séguret , Bertrand Collignon , José Halloy

Nowadays, mobile robots are deployed in many indoor environments, such as offices or hospitals. These environments are subject to changes in the traversability that often happen by following repeating patterns. In this paper, we investigate…

Robotics · Computer Science 2019-09-30 Lorenzo Nardi , Cyrill Stachniss

Spatial patterns arising from the collective behavior of individual agents are present across biological systems. While agent-based models offer a natural framework for uncovering unknown agent (e.g., cell) interactions, these stochastic…

Quantitative Methods · Quantitative Biology 2026-05-19 Yue Liu , Alexandria Volkening
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