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Advances in high-throughput technologies have originated an ever-increasing availability of omics datasets. The integration of multiple heterogeneous data sources is currently an issue for biology and bioinformatics. Multiple kernel…

Machine Learning · Statistics 2024-12-04 Mitja Briscik , Gabriele Tazza , Marie-Agnes Dillies , László Vidács , Sébastien Dejean

We present memory-efficient and scalable algorithms for kernel methods used in machine learning. Using hierarchical matrix approximations for the kernel matrix the memory requirements, the number of floating point operations, and the…

Machine Learning · Computer Science 2018-03-29 Elizaveta Rebrova , Gustavo Chavez , Yang Liu , Pieter Ghysels , Xiaoye Sherry Li

With the rapid development of large multimodal models (LMMs), multimodal understanding applications are emerging. As most LMM inference requests originate from edge devices with limited computational capabilities, the predominant inference…

Signal Processing · Electrical Eng. & Systems 2025-11-05 Cheng Yuan , Zhening Liu , Jiashu Lv , Jiawei Shao , Yufei Jiang , Jun Zhang , Xuelong Li

Correlation filter (CF) based trackers are currently ranked top in terms of their performances. Nevertheless, only some of them, such as KCF~\cite{henriques15} and MKCF~\cite{tangm15}, are able to exploit the powerful discriminability of…

Computer Vision and Pattern Recognition · Computer Science 2018-06-19 Ming Tang , Bin Yu , Fan Zhang , Jinqiao Wang

The latest trends in high-performance computing systems show an increasing demand on the use of a large scale multicore systems in a efficient way, so that high compute-intensive applications can be executed reasonably well. However, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-02-25 Juliana M. N. Silva , Cristina Boeres , Lúcia M. A. Drummond , Artur A. Pessoa

Markov chain Monte Carlo (MCMC) methods are often used in clustering since they guarantee asymptotically exact expectations in the infinite-time limit. In finite time, though, slow mixing often leads to poor performance. Modern computing…

Methodology · Statistics 2022-02-24 Tin D. Nguyen , Brian L. Trippe , Tamara Broderick

Kernel logistic regression (KLR) is a conventional nonlinear classifier in machine learning. With the explosive growth of data size, the storage and computation of large dense kernel matrices is a major challenge in scaling KLR. Even the…

Machine Learning · Computer Science 2022-07-29 Junna Zhang , Shuisheng Zhou , Cui Fu , Feng Ye

Symmetric Nonnegative Matrix Factorization (SNMF) models arise naturally as simple reformulations of many standard clustering algorithms including the popular spectral clustering method. Recent work has demonstrated that an elementary…

Computer Vision and Pattern Recognition · Computer Science 2016-09-20 Reza Borhani , Jeremy Watt , Aggelos Katsaggelos

An improved version of the sparse multiway kernel spectral clustering (KSC) is presented in this brief. The original algorithm is derived from weighted kernel principal component (KPCA) analysis formulated within the primal-dual…

Machine Learning · Computer Science 2023-10-23 Mihaly Novak , Rocco Langone , Carlos Alzate , Johan Suykens

Multi-view clustering (MVC) based on non-negative matrix factorization (NMF) and its variants have received a huge amount of attention in recent years due to their advantages in clustering interpretability. However, existing NMF-based…

Machine Learning · Computer Science 2023-03-30 Jing Li , Quanxue Gao , Qianqian Wang , Wei Xia , Xinbo Gao

In this paper, we study different discrete data clustering methods, which use the Model-Based Clustering (MBC) framework with the Multinomial distribution. Our study comprises several relevant issues, such as initialization, model…

Machine Learning · Computer Science 2015-09-08 Md. Abul Hasnat , Julien Velcin , Stéphane Bonnevay , Julien Jacques

We present an unsupervised data processing workflow that is specifically designed to obtain a fast conformational clustering of long molecular dynamics simulation trajectories. In this approach we combine two dimensionality reduction…

Chemical Physics · Physics 2023-08-09 Simon Hunkler , Kay Diederichs , Oleksandra Kukharenko , Christine Peter

One of the main computational bottlenecks when working with kernel based learning is dealing with the large and typically dense kernel matrix. Techniques dealing with fast approximations of the matrix vector product for these kernel…

Machine Learning · Computer Science 2024-04-29 Theresa Wagner , Franziska Nestler , Martin Stoll

By removing irrelevant and redundant features, feature selection aims to find a good representation of the original features. With the prevalence of unlabeled data, unsupervised feature selection has been proven effective in alleviating the…

Machine Learning · Computer Science 2024-03-25 Ziyuan Lin , Deanna Needell

Clustering problems have numerous applications and are becoming more challenging as the size of the data increases. In this paper, we consider designing clustering algorithms that can be used in MapReduce, the most popular programming…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-09-09 Alina Ene , Sungjin Im , Benjamin Moseley

This paper revisits the problem of computing empirical cumulative distribution functions (ECDF) efficiently on large, multivariate datasets. Computing an ECDF at one evaluation point requires $\mathcal{O}(N)$ operations on a dataset…

Data Structures and Algorithms · Computer Science 2021-09-21 Nicolas Langrené , Xavier Warin

The symmetric Nonnegative Matrix Factorization (NMF), a special but important class of the general NMF, has found numerous applications in data analysis such as various clustering tasks. Unfortunately, designing fast algorithms for the…

Machine Learning · Computer Science 2023-01-26 Xiao Li , Zhihui Zhu , Qiuwei Li , Kai Liu

Among the algorithms that are likely to play a major role in future exascale computing, the fast multipole method (FMM) appears as a rising star. Our previous recent work showed scaling of an FMM on GPU clusters, with problem sizes in the…

Numerical Analysis · Computer Science 2012-10-30 Rio Yokota , Lorena Barba

Clustered federated learning (CFL) addresses the performance challenges posed by data heterogeneity in federated learning (FL) by organizing edge devices with similar data distributions into clusters, enabling collaborative model training…

Machine Learning · Computer Science 2025-01-06 Yuxin Zhang , Haoyu Chen , Zheng Lin , Zhe Chen , Jin Zhao

We present a general framework for accelerating a large class of widely used Markov chain Monte Carlo (MCMC) algorithms. Our approach exploits fast, iterative approximations to the target density to speculatively evaluate many potential…

Machine Learning · Statistics 2014-03-31 Elaine Angelino , Eddie Kohler , Amos Waterland , Margo Seltzer , Ryan P. Adams