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Related papers: Hierarchical Clustering via Local Search

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We introduce the Pitman Yor Diffusion Tree (PYDT) for hierarchical clustering, a generalization of the Dirichlet Diffusion Tree (Neal, 2001) which removes the restriction to binary branching structure. The generative process is described…

Machine Learning · Statistics 2011-06-17 David A. Knowles , Zoubin Ghahramani

A sorted set (or map) is one of the most used data types in computer science. In addition to standard set operations, like Insert, Remove, and Contains, it can provide set-set operations such as Union,Intersection, and Difference. Each of…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-27 Ilya Kokorin , Vitaly Aksenov , Alena Martsenyuk

Consistent hashing is fundamental to distributed systems, but ring-based schemes can exhibit high peak-to-average load ratios unless they use many virtual nodes, while multi-probe methods improve balance at the cost of scattered memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-30 Yongjie Guan

We focus on the average-case analysis: A function w : V -> Z+ is given which defines the likelihood for a node to be the one marked, and we want the strategy that minimizes the expected number of queries. Prior to this paper, very little…

Data Structures and Algorithms · Computer Science 2009-08-10 Ferdinando Cicalese , Tobias Jacobs , Eduardo Laber , Marco Molinaro

Tree rotations (left and right) are basic local deformations allowing to transform between two unlabeled binary trees of the same size. Hence, there is a natural problem of practically finding such transformation path with low number of…

Data Structures and Algorithms · Computer Science 2016-10-20 Jarek Duda

Tree-structured LSTM is promising way to consider long-distance interaction over hierarchies. However, there have been few research efforts on the hyperparameter tuning of the construction and traversal of tree-structured LSTM. To name a…

Machine Learning · Computer Science 2020-08-24 Ruo Ando , Yoshiyasu Takefuji

Random walks can be used to search complex networks for a desired resource. To reduce search lengths, we propose a mechanism based on building random walks connecting together partial walks (PW) previously computed at each network node.…

Networking and Internet Architecture · Computer Science 2013-04-19 Víctor M. López Millán , Vicent Cholvi , Luis López , Antonio Fernández Anta

As other fundamental programming abstractions in energy-efficient computing, search trees are expected to support both high parallelism and data locality. However, existing highly-concurrent search trees such as red-black trees and AVL…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-12-11 Ibrahim Umar , Otto Anshus , Phuong Ha

The widespread use of GPS-enabled devices generates voluminous and continuous amounts of traffic data but analyzing such data for interpretable and actionable insights poses challenges. A hierarchical clustering of the trips has many uses…

Databases · Computer Science 2018-10-15 Chia-Tung Kuo , Ian Davidson

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

We give exact relations for certain types of the hierarchic fractal structures. In the blatant distinction from regular networks of the "small world" (SW) topology [1], regular fractal networks manifests the logarithmic dependence of the…

Disordered Systems and Neural Networks · Physics 2007-05-23 Gregory Surdutovich , Vladimir Gol'dshtein , Gennady Koganov

Avraham et al. [AFK+15] presented an alternative approach to parametric search, called \emph{bifurcation}, that performs faster under certain circumstances. Intuitively, when the underlying decider execution can be rolled back cheaply and…

Computational Geometry · Computer Science 2025-10-03 Sariel Har-Peled

Hypergraphs are a useful abstraction for modeling multiway relationships in data, and hypergraph clustering is the task of detecting groups of closely related nodes in such data. Graph clustering has been studied extensively, and there are…

Data Structures and Algorithms · Computer Science 2020-07-02 Nate Veldt , Austin R. Benson , Jon Kleinberg

The paper presents the first \emph{concurrency-optimal} implementation of a binary search tree (BST). The implementation, based on a standard sequential implementation of an internal tree, ensures that every \emph{schedule} is accepted,…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-03 Vitaly Aksenov , Vincent Gramoli , Petr Kuznetsov , Anna Malova , Srivatsan Ravi

The Local Search algorithm (or Hill Climbing, or Iterative Improvement) is one of the simplest heuristics to solve the Satisfiability and Max-Satisfiability problems. It is a part of many satisfiability and max-satisfiability solvers, where…

Data Structures and Algorithms · Computer Science 2008-11-18 Andrei A. Bulatov , Evgeny S. Skvortsov

The neighbor-joining algorithm is a popular phylogenetics method for constructing trees from dissimilarity maps. The neighbor-net algorithm is an extension of the neighbor-joining algorithm and is used for constructing split networks. We…

Combinatorics · Mathematics 2008-05-13 Dan Levy , Lior Pachter

This paper considers networks where relationships between nodes are represented by directed dissimilarities. The goal is to study methods for the determination of hierarchical clusters, i.e., a family of nested partitions indexed by a…

Machine Learning · Computer Science 2014-09-03 Gunnar Carlsson , Facundo Mémoli , Alejandro Ribeiro , Santiago Segarra

The development of algorithms for hierarchical clustering has been hampered by a shortage of precise objective functions. To help address this situation, we introduce a simple cost function on hierarchies over a set of points, given…

Data Structures and Algorithms · Computer Science 2015-10-20 Sanjoy Dasgupta

Samples from intimate (non-linear) mixtures are generally modeled as being drawn from a smooth manifold. Scenarios where the data contains multiple intimate mixtures with some constituent materials in common can be thought of as manifolds…

Computer Vision and Pattern Recognition · Computer Science 2017-08-15 Arun M. Saranathan , Mario Parente

Average-link is widely recognized as one of the most popular and effective methods for building hierarchical agglomerative clustering. The available theoretical analyses show that this method has a much better approximation than other…

Machine Learning · Computer Science 2024-11-11 Eduardo Sany Laber , Miguel Bastista