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Algorithmic self-assembly, a generalization of crystal growth processes, has been proposed as a mechanism for autonomous DNA computation and for bottom-up fabrication of complex nanostructures. A `program' for growing a desired structure…

Materials Science · Physics 2010-01-08 Rebecca Schulman , Erik Winfree

We present a real-time deformation method for Escher tiles -- interlocking organic forms that seamlessly tessellate the plane following symmetry rules. We formulate the problem as determining a periodic displacement field. The goal is to…

Graphics · Computer Science 2025-07-01 Crane He Chen , Vladimir G. Kim

We propose a novel graph clustering method guided by additional information on the underlying structure of the clusters (or communities). The problem is formulated as the matching of a graph to a template with smaller dimension, hence…

Machine Learning · Statistics 2021-07-06 Mateus Riva , Florian Yger , Pietro Gori , Roberto M. Cesar , Isabelle Bloch

We present a strict separation between the class of "mismatch free" self-assembly systems and general aTAM systems. Mismatch free systems are those systems in which concurrently grown parts must always agree with each other. Tile…

Computational Geometry · Computer Science 2015-02-20 Florent Becker , Pierre-Étienne Meunier

Nanoparticles with "sticky patches" have long been proposed as building blocks for the self-assembly of complex structures. The synthetic realizability of such patchy particles, however, greatly lags behind predictions of patterns they…

Soft Condensed Matter · Physics 2013-10-03 Michael Grünwald , Phillip L. Geissler

We compute the cohomology of crystallographic groups with holonomy of prime order. As an application we compute the group of gerbes associated to many six--dimensional toroidal orbifolds arising in string theory.

Algebraic Topology · Mathematics 2007-05-23 Alejandro Adem , Jianquan Ge , Jianzhong Pan , Nansen Petrosyan

We study the behavior of negatively charged colloids with two positively charged polar caps close to a planar patterned surface. The competition between the different anisotropic components of the particle-particle interaction patterns is…

Soft Condensed Matter · Physics 2018-09-25 Emanuele Locatelli , Emanuela Bianchi

We introduce an aggregation process based on \emph{templating}, where a specified number of constituent clusters must assemble on a larger aggregate, which serves as a scaffold, for a reaction to occur. A simple example is a dimer scaffold,…

Soft Condensed Matter · Physics 2025-01-14 P. L. Krapivsky , S. Redner

Inspired by the quest for shape-shifting structures in a range of applications, we show how to create morphable structural materials using a neutrally stable unit cell as a building block. This unit cell is a self-stressed hinged structure…

Soft Condensed Matter · Physics 2021-10-18 Gaurav Chaudhary , S Ganga Prasath , Edward Soucy , L Mahadevan

We show that the Tile Assembly Model exhibits a strong notion of universality where the goal is to give a single tile assembly system that simulates the behavior of any other tile assembly system. We give a tile assembly system that is…

Computational Complexity · Computer Science 2016-09-08 David Doty , Jack H. Lutz , Matthew J. Patitz , Scott M. Summers , Damien Woods

We stress the importance of stochastic geometry as a branch of mathematical statistics particularly suited to model and investigate nontrivial spatial patterns. One of its key concepts, Voronoi tessellations, represents a versatile and…

Astrophysics · Physics 2007-05-23 Rien van de Weygaert

A tessellation or tiling is a collection of sets, called tiles, that cover a plane without gaps and overlaps. The present note is an invitation to get to know the beauty and majesty of tessellations and triangulation of orientable surfaces.

History and Overview · Mathematics 2023-03-31 Gianluca Faraco

We present a unified framework to construct and classify topological crystalline superconductors (TCSCs). The building blocks are one-dimensional topological superconductors (TSCs) protected solely by onsite symmetries, which are arranged…

Superconductivity · Physics 2022-05-27 Bingrui Peng , Hongming Weng , Chen Fang

We present a scheme to explicitly construct and classify general topological states jointly protected by an onsite symmetry group and a spatial symmetry group. We show that all these symmetry protected topological states can be…

Mesoscale and Nanoscale Physics · Physics 2020-01-03 Zhida Song , Sheng-Jie Huang , Yang Qi , Chen Fang , Michael Hermele

We describe computer algorithms that produce the complete set of isohedral tilings by n-omino or n-iamond tiles in which the tiles are fundamental domains and the tilings have 3-, 4-, or 6-fold rotational symmetry. The symmetry groups of…

Computational Geometry · Computer Science 2012-01-17 Hiroshi Fukuda , Chiaki Kanomata , Nobuaki Mutoh , Gisaku Nakamura , Doris Schattschneider

As "2D" materials (i.e. materials just a few atoms thick) continue to gain prominence, understanding their symmetries is critical for unlocking their full potential. In this work, we present comprehensive tables that tabulate the rod group…

Materials Science · Physics 2025-06-17 Bernard Field , Sinéad M. Griffin

The process of self-assembly is guided by the minimization of free energy, which limits the symmetries available for assembly and ultimately the usefulness of devices fabricated in this fashion. Here, we demonstrate experimentally for the…

We consider here square tilings of the plane. By extending the formalism introduced in [3] we build a correspondence between plane maps endowed with an harmonic vector and square tilings satisfying a condition of regularity. In the case of…

Combinatorics · Mathematics 2011-01-04 Mathieu Dutour Sikirić

Crystal structure modeling with graph neural networks is essential for various applications in materials informatics, and capturing SE(3)-invariant geometric features is a fundamental requirement for these networks. A straightforward…

Machine Learning · Computer Science 2025-03-05 Yusei Ito , Tatsunori Taniai , Ryo Igarashi , Yoshitaka Ushiku , Kanta Ono

Motivated by applications in reliable and secure communication, we address the problem of tiling (or partitioning) a finite constellation in $\mathbb{Z}_{2^L}^n$ by subsets, in the case that the constellation does not possess an abelian…

Information Theory · Computer Science 2021-05-13 Maiara F. Bollauf , Øyvind Ytrehus