Related papers: Enumerating Graphlets with Amortized Time Complexi…
Let $G$ be a graph on $n$ vertices. We call a subset $A$ of the vertex set $V(G)$ \emph{$k$-small} if, for every vertex $v \in A$, $\deg(v) \le n - |A| + k$. A subset $B \subseteq V(G)$ is called \emph{$k$-large} if, for every vertex $u \in…
In the k-arc connected subgraph problem, we are given a directed graph G and an integer k and the goal is the find a subgraph of minimum cost such that there are at least k-arc disjoint paths between any pair of vertices. We give a simple…
The question to enumerate all inclusion-minimal connected dominating sets in a graph of order $n$ in time significantly less than $2^n$ is an open question that was asked in many places. We answer this question affirmatively, by providing…
Graph-based methods are known to be successful in many machine learning and pattern classification tasks. These methods consider semi-structured data as graphs where nodes correspond to primitives (parts, interest points, segments, etc.)…
Interval and proper interval graphs are very well-known graph classes, for which there is a wide literature. As a consequence, some generalizations of interval graphs have been proposed, in which graphs in general are expressed in terms of…
In the $k$-cut problem, we want to find the lowest-weight set of edges whose deletion breaks a given (multi)graph into $k$ connected components. Algorithms of Karger \& Stein can solve this in roughly $O(n^{2k})$ time. On the other hand,…
Graph coloring problems are a central topic of study in the theory of algorithms. We study the problem of partially coloring partially colorable graphs. For $\alpha \leq 1$ and $k \in \mathbb{Z}^+$, we say that a graph $G=(V,E)$ is…
Graphlets are defined as k-node connected induced subgraph patterns. For an undirected graph, 3-node graphlets include close triangle and open triangle. When k = 4, there are six types of graphlets, e.g., tailed-triangle and clique are two…
In the $k$-cut problem, we are given an edge-weighted graph and want to find the least-weight set of edges whose deletion breaks the graph into $k$ connected components. Algorithms due to Karger-Stein and Thorup showed how to find such a…
A graph $G$ is a $k$-leaf power if there exists a tree $T$ whose leaf set is $V(G)$, and such that $uv \in E(G)$ if and only if the distance between $u$ and $v$ in $T$ is at most $k$. The graph classes of $k$-leaf powers have several…
Understanding spatial correlation is vital in many fields including epidemiology and social science. Lee, Meeks and Pettersson (Stat. Comput. 2021) recently demonstrated that improved inference for areal unit count data can be achieved by…
Canonical orderings and their relatives such as st-numberings have been used as a key tool in algorithmic graph theory for the last decades. Recently, a unifying concept behind all these orders has been shown: they can be described by a…
The focus of this paper is two fold. Firstly, we present a logical approach to graph modification problems such as minimum node deletion, edge deletion, edge augmentation problems by expressing them as an expression in first order (FO)…
The node-averaged complexity of a distributed algorithm running on a graph $G=(V,E)$ is the average over the times at which the nodes $V$ of $G$ finish their computation and commit to their outputs. We study the node-averaged complexity for…
For fixed integers $r,\ell \geq 0$, a graph $G$ is called an {\em $(r,\ell)$-graph} if the vertex set $V(G)$ can be partitioned into $r$ independent sets and $\ell$ cliques. This brings us to the following natural parameterized questions:…
We study the parameterized complexity of a broad class of problems called "local graph partitioning problems" that includes the classical fixed cardinality problems as max k-vertex cover, k-densest subgraph, etc. By developing a technique…
A signed graph is a graph where each edge receives a sign, positive or negative. The signed graph model has been used in many real applications, such as protein complex discovery and social network analysis. Finding cohesive subgraphs in…
We present the first optimal algorithm for the classical problem of listing all the cycles in an undirected graph. We exploit their properties so that the total cost is the time taken to read the input graph plus the time to list the…
This work introduces a novel algorithm for finding the connected components of a graph where the vertices and edges are grouped into sets defining a Set--Based Graph. The algorithm, under certain restrictions on those sets, has the…
We initiate the study of computational problems on $k$-mers (strings of length $k$) in labeled graphs. As a starting point, we consider the problem of counting the number of distinct $k$-mers found on the walks of a graph. We establish that…