Related papers: Dataset Mention Extraction in Scientific Articles …
In this paper, we formulate keyphrase extraction from scholarly articles as a sequence labeling task solved using a BiLSTM-CRF, where the words in the input text are represented using deep contextualized embeddings. We evaluate the proposed…
Today, full-texts of scientific articles are often stored in different locations than the used datasets. Dataset registries aim at a closer integration by making datasets citable but authors typically refer to datasets using inconsistent…
Machine learning is widely utilized across various industries. Identifying the appropriate machine learning models and datasets for specific tasks is crucial for the effective industrial application of machine learning. However, this…
Scientist learn early on how to cite scientific sources to support their claims. Sometimes, however, scientists have challenges determining where a citation should be situated -- or, even worse, fail to cite a source altogether.…
Scientific full text papers are usually stored in separate places than their underlying research datasets. Authors typically make references to datasets by mentioning them for example by using their titles and the year of publication.…
Identifying suitable datasets for a research question remains challenging because existing dataset search engines rely heavily on metadata quality and keyword overlap, which often fail to capture the semantic intent of scientific…
Tracking how data is mentioned and used in research papers provides critical insights for improving data discoverability, quality, and production. However, manually identifying and classifying dataset mentions across vast academic…
Literature analysis facilitates researchers to acquire a good understanding of the development of science and technology. The traditional literature analysis focuses largely on the literature metadata such as topics, authors, abstracts,…
A citation is a well-established mechanism for connecting scientific artifacts. Citation networks are used by citation analysis for a variety of reasons, prominently to give credit to scientists' work. However, because of current citation…
Crucial information about the practice of healthcare is recorded only in free-form text, which creates an enormous opportunity for high-impact NLP. However, annotated healthcare datasets tend to be small and expensive to obtain, which…
The recognition of dataset names is a critical task for automatic information extraction in scientific literature, enabling researchers to understand and identify research opportunities. However, existing corpora for dataset mention…
With the advent of large language models (LLMs), the vast unstructured text within millions of academic papers is increasingly accessible for materials discovery, although significant challenges remain. While LLMs offer promising few- and…
The scientific literature contains a wealth of cutting-edge knowledge in the field of materials science, as well as useful data (e.g., numerical data from experimental results, material properties and structure). These data are critical for…
Automatic extraction of clinical concepts is an essential step for turning the unstructured data within a clinical note into structured and actionable information. In this work, we propose a clinical concept extraction model for automatic…
The increasing volume of scholarly publications requires advanced tools for efficient knowledge discovery and management. This paper introduces ongoing work on a system using Large Language Models (LLMs) for the semantic extraction of key…
Bioinformatics workflows are essential for complex biological data analyses and are often described in scientific articles with source code in public repositories. Extracting detailed workflow information from articles can improve…
Automated extraction of concepts from patient clinical records is an essential facilitator of clinical research. For this reason, the 2010 i2b2/VA Natural Language Processing Challenges for Clinical Records introduced a concept extraction…
Claims are a fundamental unit of scientific discourse. The exponential growth in the number of scientific publications makes automatic claim extraction an important problem for researchers who are overwhelmed by this information overload.…
In the age of information overload, content management for online news articles relies on efficient summarization to enhance accessibility and user engagement. This article addresses the challenge of extractive text summarization by…
In this paper, we study the importance of context in predicting the citation worthiness of sentences in scholarly articles. We formulate this problem as a sequence labeling task solved using a hierarchical BiLSTM model. We contribute a new…