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Graph Neural Networks (GNNs) are deep learning methods which provide the current state of the art performance in node classification tasks. GNNs often assume homophily -- neighboring nodes having similar features and labels--, and therefore…

Machine Learning · Computer Science 2021-10-26 Liheng Ma , Reihaneh Rabbany , Adriana Romero-Soriano

In this paper, we develop a novel local graph pooling method, namely the Separated Subgraph-based Hierarchical Pooling (SSHPool), for graph classification. We commence by assigning the nodes of a sample graph into different clusters,…

Artificial Intelligence · Computer Science 2024-08-14 Zhuo Xu , Lixin Cui , Ming Li , Yue Wang , Ziyu Lyu , Hangyuan Du , Lu Bai , Philip S. Yu , Edwin R. Hancock

Brain surface analysis is essential to neuroscience, however, the complex geometry of the brain cortex hinders computational methods for this task. The difficulty arises from a discrepancy between 3D imaging data, which is represented in…

Computer Vision and Pattern Recognition · Computer Science 2019-11-25 Karthik Gopinath , Christian Desrosiers , Herve Lombaert

We propose a deep Graph Neural Network (GNN) model that alternates two types of layers. The first type is inspired by Reservoir Computing (RC) and generates new vertex features by iterating a non-linear map until it converges to a fixed…

Machine Learning · Computer Science 2021-04-13 Filippo Maria Bianchi , Claudio Gallicchio , Alessio Micheli

Hierarchical Pooling Models have demonstrated strong performance in classifying graph-structured data. While numerous innovative methods have been proposed to design cluster assignments and coarsening strategies, the relationships between…

Machine Learning · Computer Science 2025-10-07 Michael Yang

With the development of graph convolutional networks (GCN), deep learning methods have started to be used on graph data. In additional to convolutional layers, pooling layers are another important components of deep learning. However, no…

Artificial Intelligence · Computer Science 2019-03-12 Hongyang Gao , Yongjun Chen , Shuiwang Ji

Graph Neural Networks (GNNs) have been highly successful for the node classification task. GNNs typically assume graphs are homophilic, i.e. neighboring nodes are likely to belong to the same class. However, a number of real-world graphs…

Machine Learning · Computer Science 2024-09-20 Yurui Lai , Taiyan Zhang , Rui Fan

Graph classification is an important problem with applications across many domains, like chemistry and bioinformatics, for which graph neural networks (GNNs) have been state-of-the-art (SOTA) methods. GNNs are designed to learn node-level…

Machine Learning · Computer Science 2021-08-25 Lanning Wei , Huan Zhao , Quanming Yao , Zhiqiang He

Graph neural networks get significant attention for graph representation and classification in machine learning community. Attention mechanism applied on the neighborhood of a node improves the performance of graph neural networks.…

Machine Learning · Computer Science 2020-07-22 Sambaran Bandyopadhyay , Manasvi Aggarwal , M. Narasimha Murty

We introduce a novel variant of GNN for particle tracking called Hierarchical Graph Neural Network (HGNN). The architecture creates a set of higher-level representations which correspond to tracks and assigns spacepoints to these tracks,…

High Energy Physics - Experiment · Physics 2023-03-06 Ryan Liu , Paolo Calafiura , Steven Farrell , Xiangyang Ju , Daniel Thomas Murnane , Tuan Minh Pham

Graph neural networks (GNNs) have been successfully applied to learning representation on graphs in many relational tasks. Recently, researchers study neural architecture search (NAS) to reduce the dependence of human expertise and explore…

Machine Learning · Computer Science 2021-09-06 Shaofei Cai , Liang Li , Xinzhe Han , Zheng-jun Zha , Qingming Huang

Graph-structured data naturally occurs in many research fields, such as chemistry and sociology. The relational information contained therein can be leveraged to statistically model graph properties through geometrical deep learning. Graph…

Machine Learning · Computer Science 2024-09-19 T. Snelleman , B. M. Renting , H. H. Hoos , J. N. van Rijn

Graph Neural Networks achieve state-of-the-art performance on a plethora of graph classification tasks, especially due to pooling operators, which aggregate learned node embeddings hierarchically into a final graph representation. However,…

Machine Learning · Computer Science 2022-09-09 Alexandre Duval , Fragkiskos Malliaros

Graph-based anomaly detection finds numerous applications in the real-world. Thus, there exists extensive literature on the topic that has recently shifted toward deep detection models due to advances in deep learning and graph neural…

Machine Learning · Computer Science 2022-10-21 Lingxiao Zhao , Saurabh Sawlani , Arvind Srinivasan , Leman Akoglu

Graph neural networks (GNNs) demonstrate a robust capability for representation learning on graphs with complex structures, showcasing superior performance in various applications. The majority of existing GNNs employ a graph convolution…

Machine Learning · Computer Science 2025-02-19 Jinlu Wang , Jipeng Guo , Yanfeng Sun , Junbin Gao , Shaofan Wang , Yachao Yang , Baocai Yin

We consider the problem of representation learning for graph data. Convolutional neural networks can naturally operate on images, but have significant challenges in dealing with graph data. Given images are special cases of graphs with…

Machine Learning · Computer Science 2019-05-15 Hongyang Gao , Shuiwang Ji

Graph Neural Networks (GNNs) have led to state-of-the-art performance on a variety of machine learning tasks such as recommendation, node classification and link prediction. Graph neural network models generate node embeddings by merging…

Machine Learning · Computer Science 2020-11-04 Yunpeng Weng , Xu Chen , Liang Chen , Wei Liu

Classifying nodes in a graph is a common problem. The ideal classifier must adapt to any imbalances in the class distribution. It must also use information in the clustering structure of real-world graphs. Existing Graph Neural Networks…

This paper presents a novel graph-based deep learning model for tasks involving relations between two nodes (edge-centric tasks), where the focus lies on predicting relationships and interactions between pairs of nodes rather than node…

Machine Learning · Computer Science 2025-07-08 Eugenio Borzone , Leandro Di Persia , Matias Gerard

In heterophilic graphs, where neighboring nodes often belong to different classes, conventional Graph Neural Networks (GNNs) struggle due to their reliance on local homophilous neighborhoods. Prior studies suggest that modeling edge…

Machine Learning · Computer Science 2025-09-03 Arman Gupta , Govind Waghmare , Gaurav Oberoi , Nitish Srivastava