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Related papers: Strict Self-Assembly of Discrete Self-Similar Frac…

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This paper answers a long-standing open question in tile-assembly theory, namely that it is possible to strictly assemble discrete self-similar fractals (DSSFs) in the abstract Tile-Assembly Model (aTAM). We prove this in 2 separate ways,…

Computational Geometry · Computer Science 2024-10-11 Florent Becker , Daniel Hader , Matthew J. Patitz

In this paper, we search for {\it absolute} limitations of the Tile Assembly Model (TAM), along with techniques to work around such limitations. Specifically, we investigate the self-assembly of fractal shapes in the TAM. We prove that no…

Computational Complexity · Computer Science 2008-04-26 Matthew J. Patitz , Scott M. Summers

We consider the self-assembly of fractals in one of the most well-studied models of tile based self-assembling systems known as the Two-handed Tile Assembly Model (2HAM). In particular, we focus our attention on a class of fractals called…

Emerging Technologies · Computer Science 2018-10-12 Jacob Hendricks , Joseph Opseth

In this paper we consider the problem of the strict self-assembly of infinite fractals within tile self-assembly. In particular, we provide tile assembly algorithms for the assembly of the discrete Sierpinski triangle and the discrete…

Computational Geometry · Computer Science 2015-05-26 Cameron T. Chalk , Dominic A. Fernandez , Alejandro Huerta , Mario A. Maldonado , Robert T. Schweller , Leslie Sweet

In this paper, we present high-level overviews of tile-based self-assembling systems capable of producing complex, infinite, aperiodic structures known as discrete self-similar fractals. Fractals have a variety of interesting mathematical…

Emerging Technologies · Computer Science 2016-12-26 Jacob Hendricks , Meagan Olsen , Matthew J. Patitz , Trent A. Rogers , Hadley Thomas

In this paper, we prove that in the abstract Tile Assembly Model (aTAM), an accretion-based model which only allows for a single tile to attach to a growing assembly at each step, there are no tile assembly systems capable of…

Emerging Technologies · Computer Science 2018-07-18 Jacob Hendricks , Joseph Opseth , Matthew Patitz , Scott Summers

We demonstrate existence of a tile assembly system that self-assembles the statistically self-similar Sierpinski Triangle in the Winfree-Rothemund Tile Assembly Model. This appears to be the first paper that considers self-assembly of a…

Computational Complexity · Computer Science 2011-07-21 Aaron Sterling

Winfree's abstract Tile Assembly Model (aTAM) is a model of molecular self-assembly of DNA complexes known as tiles, which float freely in solution and attach one at a time to a growing "seed" assembly based on specific binding sites on…

Computational Complexity · Computer Science 2015-03-17 Ho-Lin Chen , David Doty , Shinnosuke Seki

A \emph{pier fractal} is a discrete self-similar fractal whose generator contains at least one \emph{pier}, that is, a member of the generator with exactly one adjacent point. Tree fractals and pinch-point fractals are special cases of pier…

Computational Geometry · Computer Science 2014-06-18 David Furcy , Scott M. Summers

We introduce the notion of (abelian) similarity scheme, as a constructive model for topological self-similar fractals, in the same way in which the notion of iterated function system furnishes a constructive notion of self-similar fractals…

Functional Analysis · Mathematics 2024-07-11 Fabio E. G. Cipriani , Daniele Guido , Tommaso Isola , Jean-Luc Sauvageot

It is well known that the discrete Sierpinski triangle can be defined as the nonzero residues modulo 2 of Pascal's triangle, and that from this definition one can easily construct a tileset with which the discrete Sierpinski triangle…

Other Computer Science · Computer Science 2009-01-22 Steven M. Kautz , James I. Lathrop

Winfree (1998) showed that discrete Sierpinski triangles can self-assemble in the Tile Assembly Model. A striking molecular realization of this self-assembly, using DNA tiles a few nanometers long and verifying the results by atomic-force…

Discrete Mathematics · Computer Science 2009-03-11 James I. Lathrop , Jack H. Lutz , Scott M. Summers

The Tile Assembly Model is a Turing universal model that Winfree introduced in order to study the nanoscale self-assembly of complex (typically aperiodic) DNA crystals. Winfree exhibited a self-assembly that tiles the first quadrant of the…

Computational Complexity · Computer Science 2015-05-18 Jack H. Lutz , Brad Shutters

We investigate the role of nondeterminism in Winfree's abstract Tile Assembly Model (aTAM), which was conceived to model artificial molecular self-assembling systems constructed from DNA. Of particular practical importance is to find tile…

Computational Complexity · Computer Science 2010-11-29 Nathaniel Bryans , Ehsan Chiniforooshan , David Doty , Lila Kari , Shinnosuke Seki

In this paper we define the Dupled abstract Tile Assembly Model (DaTAM), which is a slight extension to the abstract Tile Assembly Model (aTAM) that allows for not only the standard square tiles, but also "duple" tiles which are rectangles…

Emerging Technologies · Computer Science 2014-03-10 Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers , Scott M. Summers

The concept of self-similarity on subsets of algebraic varieties is defined by considering algebraic endomorphisms of the variety as `similarity' maps. Self-similar fractals are subsets of algebraic varieties which can be written as a…

Number Theory · Mathematics 2015-04-21 Arash Rastegar

Accurate segmentation of long and thin tubular structures is required in a wide variety of areas such as biology, medicine, and remote sensing. The complex topology and geometry of such structures often pose significant technical…

Image and Video Processing · Electrical Eng. & Systems 2024-07-23 Jiaxing Huang , Yanfeng Zhou , Yaoru Luo , Guole Liu , Heng Guo , Ge Yang

In this paper, we investigate the abilities of systems of self-assembling tiles which can each pass a constant number of signals to their immediate neighbors to create replicas of input shapes. Namely, we work within the Signal-passing Tile…

Emerging Technologies · Computer Science 2022-04-05 Andrew Alseth , Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers

In the abstract Tile Assembly Model (aTAM) square tiles self-assemble, autonomously binding via glues on their edges, to form structures. Algorithmic aTAM systems can be designed in which the patterns of tile attachments are forced to…

Emerging Technologies · Computer Science 2022-11-10 Andrew Alseth , Matthew J. Patitz

In this work we propose a generalization of Winfree's abstract Tile Assembly Model (aTAM) in which tile types are assigned rigid shapes, or geometries, along each tile face. We examine the number of distinct tile types needed to assemble…

Computational Geometry · Computer Science 2015-03-19 Bin Fu , Matthew J. Patitz , Robert T. Schweller , Bobby Sheline
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