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Despite recent progress, Biomedical Entity Linking (BEL) with large language models (LLMs) remains computationally inefficient and challenging to deploy in practical settings. In this work, we demonstrate that instruction-tuning of…

Computation and Language · Computer Science 2026-05-22 Darya Shlyk , Stefano Montanelli , Lawrence Hunter

Prompt engineering is crucial for achieving reliable and effective outputs from large language models (LLMs), but its design requires specialized knowledge of prompting techniques and a deep understanding of target tasks. To address this…

Computation and Language · Computer Science 2025-10-22 Yohei Ikenoue , Hitomi Tashiro , Shigeru Kuroyanagi

Probing Pre-trained Language Models (PLMs) using prompts has indirectly implied that language models (LMs) can be treated as knowledge bases. To this end, this phenomena has been effective especially when these LMs are fine-tuned towards…

Computation and Language · Computer Science 2022-04-08 M. Abaho , D. Bollegala , P. Williamson , S. Dodd

Time series forecasting aims to model temporal dependencies among variables for future state inference, holding significant importance and widespread applications in real-world scenarios. Although deep learning-based methods have achieved…

Machine Learning · Computer Science 2026-05-21 Zesen Wang , Lijuan Lan , Yonggang Li

Most large language models (LLMs) are trained once and never updated; thus, they lack the ability to dynamically adapt to our ever-changing world. In this work, we perform a detailed study of the factuality of LLM-generated text in the…

Computation and Language · Computer Science 2023-11-23 Tu Vu , Mohit Iyyer , Xuezhi Wang , Noah Constant , Jerry Wei , Jason Wei , Chris Tar , Yun-Hsuan Sung , Denny Zhou , Quoc Le , Thang Luong

Large Language Models (LLMs) have shown promising results on various language and vision tasks. Recently, there has been growing interest in applying LLMs to graph-based tasks, particularly on Text-Attributed Graphs (TAGs). However, most…

Machine Learning · Computer Science 2024-06-10 Zhongmou He , Jing Zhu , Shengyi Qian , Joyce Chai , Danai Koutra

Pre-trained large language models (LLMs) have become a cornerstone of modern natural language processing, with their capabilities extending across a wide range of applications and languages. However, the fine-tuning of multilingual LLMs,…

Computation and Language · Computer Science 2025-07-08 Wanru Zhao , Yihong Chen , Royson Lee , Xinchi Qiu , Yan Gao , Hongxiang Fan , Nicholas D. Lane

Conversational query rewriting is crucial for effective conversational search, yet traditional supervised methods require substantial labeled data, which is scarce in low-resource settings. This paper introduces Prompt-Guided In-Context…

Computation and Language · Computer Science 2025-02-24 Raymond Wilson , Chase Carter , Cole Graham

Prompt engineering is a technique that involves augmenting a large pre-trained model with task-specific hints, known as prompts, to adapt the model to new tasks. Prompts can be created manually as natural language instructions or generated…

Computer Vision and Pattern Recognition · Computer Science 2023-07-25 Jindong Gu , Zhen Han , Shuo Chen , Ahmad Beirami , Bailan He , Gengyuan Zhang , Ruotong Liao , Yao Qin , Volker Tresp , Philip Torr

Large language models (LLMs) are widely used in decision-making, but their reliability, especially in critical tasks like healthcare, is not well-established. Therefore, understanding how LLMs reason and make decisions is crucial for their…

Machine Learning · Computer Science 2025-02-25 Ze Yu Zhang , Arun Verma , Finale Doshi-Velez , Bryan Kian Hsiang Low

Linking biomedical entities is an essential aspect in biomedical natural language processing tasks, such as text mining and question answering. However, a difficulty of linking the biomedical entities using current large language models…

Computation and Language · Computer Science 2023-08-29 Xi Yan , Cedric Möller , Ricardo Usbeck

This paper explores the application of prompt engineering to enhance the performance of large language models (LLMs) in the domain of Traditional Chinese Medicine (TCM). We propose TCM-Prompt, a framework that integrates various pre-trained…

Computation and Language · Computer Science 2024-10-28 Yirui Chen , Qinyu Xiao , Jia Yi , Jing Chen , Mengyang Wang

Large language models (LLMs) often struggle with complex mathematical tasks, prone to "hallucinating" incorrect answers due to their reliance on statistical patterns. This limitation is further amplified in average Small LangSLMs with…

Knowledge Graph (KG) inductive reasoning, which aims to infer missing facts from new KGs that are not seen during training, has been widely adopted in various applications. One critical challenge of KG inductive reasoning is handling…

Artificial Intelligence · Computer Science 2024-06-21 Kai Wang , Yuwei Xu , Zhiyong Wu , Siqiang Luo

The Vision Foundation Model has recently gained attention in medical image analysis. Its zero-shot learning capabilities accelerate AI deployment and enhance the generalizability of clinical applications. However, segmenting pathological…

Computer Vision and Pattern Recognition · Computer Science 2024-07-16 Can Cui , Ruining Deng , Junlin Guo , Quan Liu , Tianyuan Yao , Haichun Yang , Yuankai Huo

Language model (LM) pretraining can learn various knowledge from text corpora, helping downstream tasks. However, existing methods such as BERT model a single document, and do not capture dependencies or knowledge that span across…

Computation and Language · Computer Science 2022-03-31 Michihiro Yasunaga , Jure Leskovec , Percy Liang

Utilizing large language models (LLMs) for zero-shot document ranking is done in one of two ways: (1) prompt-based re-ranking methods, which require no further training but are only feasible for re-ranking a handful of candidate documents…

Information Retrieval · Computer Science 2024-10-22 Shengyao Zhuang , Xueguang Ma , Bevan Koopman , Jimmy Lin , Guido Zuccon

Knowledge infusion is a promising method for enhancing Large Language Models for domain-specific NLP tasks rather than pre-training models over large data from scratch. These augmented LLMs typically depend on additional pre-training or…

Computation and Language · Computer Science 2024-03-05 Kinshuk Vasisht , Balaji Ganesan , Vikas Kumar , Vasudha Bhatnagar

Clinical decision support systems require models that are not only highly accurate but also equitable and sensitive to the implications of missed diagnoses. In this study, we introduce a knowledge-guided in-context learning (ICL) framework…

Machine Learning · Computer Science 2025-07-28 Fatemeh Nazary , Yashar Deldjoo , Tommaso Di Noia , Eugenio di Sciascio

Aligning terminological resources, including ontologies, controlled vocabularies, taxonomies, and value sets is a critical part of data integration in many domains such as healthcare, chemistry, and biomedical research. Entity mapping is…

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