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A major goal in nanoscience and nanotechnology is the self-assembly of any desired complex structure with a system of particles interacting through simple potentials. To achieve this objective, intense experimental and theoretical efforts…

Soft Condensed Matter · Physics 2014-09-11 Daniel Salgado-Blanco , Carlos I. Mendoza

In the standard DNA brick set-up, distinct 32-nucleotide strands of single-stranded DNA are each designed to bind specifically to four other such molecules. Experimentally, it has been demonstrated that the overall yield is increased if…

Soft Condensed Matter · Physics 2017-04-28 Hannah Wayment-Steele , Daan Frenkel , Aleks Reinhardt

The inverse problem of designing component interactions to target emergent structure is fundamental to numerous applications in biotechnology, materials science, and statistical physics. Equally important is the inverse problem of designing…

Computational Physics · Physics 2020-11-20 Carl P. Goodrich , Ella M. King , Samuel S. Schoenholz , Ekin D. Cubuk , Michael Brenner

Increasing evidence suggests that active matter exhibits instances of mixed symmetry that cannot be fully described by either polar or nematic formalism. Here, we introduce a minimal model that integrates self-propulsion into the active…

Soft Condensed Matter · Physics 2025-09-03 Niels de Graaf Sousa , Simon Guldager Andersen , Aleksandra Ardaševa , Amin Doostmohammadi

A microscopic approach to macroeconomic features is intended. A model for macroeconomic behavior under heterogeneous spatial economic conditions is reviewed. A birth-death lattice gas model taking into account the influence of an economic…

Statistical Mechanics · Physics 2009-11-10 Marcel Ausloos , Paulette Clippe , Janusz Miśkiewicz , Andrzej Pekalski

Steady structures originating from dynamic self-assembly have begun to show their advantages in new generation materials, and pose challenges to equilibrium self-assembly. In view of the important role of confinement in self-assembly, here,…

Computational Physics · Physics 2019-08-06 Rui-fen Zhang , Chun-lai Ren , Jia-wei Feng , Yu-qiang Ma

The actin cytoskeleton is remarkably adaptable and multifunctional. It often organizes into nematic bundles such as contractile rings or stress fibers. However, how a uniform and isotropic actin gel self-organizes into dense nematic bundles…

Self-assembling, semi-flexible polymers are ubiquitous in biology and technology. However, there remain conflicting accounts of the equilibrium kinetics for such an important system. Here, by focusing on a dynamical description of a minimal…

Soft Condensed Matter · Physics 2018-07-17 Chiu Fan Lee

Self-alignment describes the property of a polar active unit to align or anti-align its orientation towards its velocity. In contrast to mutual alignment, where the headings of multiple active units tend to directly align to each other --…

Soft Condensed Matter · Physics 2025-12-15 Paul Baconnier , Olivier Dauchot , Vincent Démery , Gustavo Düring , Silke Henkes , Cristián Huepe , Amir Shee

Experiments have reached a monumental capacity for designing and synthesizing microscopic particles for self-assembly, making it possible to precisely control particle concentrations, shapes, and interactions. However, more physical insight…

Soft Condensed Matter · Physics 2026-02-19 Maximilian C. Hübl , Thomas E. Videbæk , Daichi Hayakawa , W. Benjamin Rogers , Carl P. Goodrich

Thermodynamical features of Xe system is investigated as functions of temperature and freeze-out density in the frame of lattice gas model. The calculation shows different temperature dependence of physical observables at different…

Nuclear Theory · Physics 2009-10-31 Y. G. Ma , Q. M. Su , W. Q. Shen , J. S. Wang , D. Q. Fang , X. Z. Cai , H. Y. Zhang , D. D. Han

We run stochastic simulations of the spatial version of the rock-paper-scissors game, considering that individuals use sensory abilities to scan the environment to detect the presence of enemies. If the local dangerousness level is above a…

Populations and Evolution · Quantitative Biology 2023-05-04 J. Menezes , E. Rangel

The interplay between shape anisotropy and directed long-range interactions enables the self-assembly of complex colloidal structures. As a recent highlight, ellipsoidal particles polarized in an external electric field were observed to…

Multifarious assembly models consider multiple structures assembled from a shared set of components, reflecting the efficient usage of components in biological self-assembly. These models are subject to a high-dimensional parameter space,…

Soft Condensed Matter · Physics 2025-09-30 Jakob Metson , Saeed Osat , Ramin Golestanian

We show that diversity, in the form of quenched noise, can have a constructive effect in the dynamics of extended systems. We first consider a bistable $\phi^4$ model composed by many coupled units and show that the global response to an…

Statistical Mechanics · Physics 2009-11-11 Raúl Toral , Claudio J. Tessone , João Viana Lopes

We propose a general framework for solving inverse self-assembly problems, i.e. designing interactions between elementary units such that they assemble spontaneously into a predetermined structure. Our approach uses patchy particles as…

Soft Condensed Matter · Physics 2022-07-13 John Russo , Flavio Romano , Lukas Kroc , Francesco Sciortino , Lorenzo Rovigatti , Petr Sulc

The cytoplasm is a heterogeneous mixture containing many types of proteins that self-assemble into a wide variety of complexes. The accuracy and speed of cytoplasmic self-assembly is astonishing because it involves the correct…

Statistical Mechanics · Physics 2025-11-21 Félix Benoist , Pablo Sartori

A new type of dynamical behavior of a multistable system is reported. We found that a simple non-equilibrium system can reduce its effective temperature autonomously at a global minimum if the residual frustration at a global minimum is…

adap-org · Physics 2009-10-28 Tsuyoshi Hondou

Anisotropy at the level of the inter-particle interaction provides the particles with specific instructions for the self-assembly of target structures. The ability to synthesize non-spherical colloids, together with the possibility of…

Soft Condensed Matter · Physics 2020-01-03 Carina Karner , Christoph Dellago , Emanuela Bianchi

The increased awareness regarding the impact of energy consumption on the environment has led to an increased focus on reducing energy consumption. Feedback on the appliance level energy consumption can help in reducing the energy demands…

Systems and Control · Electrical Eng. & Systems 2019-07-16 Shalini Pandey , George Karypis
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