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We introduce Clinical ModernBERT, a transformer based encoder pretrained on large scale biomedical literature, clinical notes, and medical ontologies, incorporating PubMed abstracts, MIMIC IV clinical data, and medical codes with their…

Computation and Language · Computer Science 2025-04-08 Simon A. Lee , Anthony Wu , Jeffrey N. Chiang

The current cancer treatment practice collects multimodal data, such as radiology images, histopathology slides, genomics and clinical data. The importance of these data sources taken individually has fostered the recent raise of radiomics…

Machine Learning · Computer Science 2023-06-16 Matteo Tortora , Ermanno Cordelli , Rosa Sicilia , Lorenzo Nibid , Edy Ippolito , Giuseppe Perrone , Sara Ramella , Paolo Soda

Self-supervised learning is crucial for clinical imaging applications, given the lack of explicit labels in healthcare. However, conventional approaches that rely on precise vision-language alignment are not always feasible in complex…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Jielin Qiu , Peide Huang , Makiya Nakashima , Jaehyun Lee , Jiacheng Zhu , Wilson Tang , Pohao Chen , Christopher Nguyen , Byung-Hak Kim , Debbie Kwon , Douglas Weber , Ding Zhao , David Chen

In the age of information overload, content management for online news articles relies on efficient summarization to enhance accessibility and user engagement. This article addresses the challenge of extractive text summarization by…

Machine Learning · Computer Science 2025-09-22 Sajib Biswas , Milon Biswas , Arunima Mandal , Fatema Tabassum Liza , Joy Sarker

Radiology plays a pivotal role in modern medicine due to its non-invasive diagnostic capabilities. However, the manual generation of unstructured medical reports is time consuming and prone to errors. It creates a significant bottleneck in…

Computer Vision and Pattern Recognition · Computer Science 2025-01-22 Md. Rakibul Islam , Md. Zahid Hossain , Mustofa Ahmed , Most. Sharmin Sultana Samu

Radiology report generation (RRG) has emerged as a promising approach to alleviate radiologists' workload and reduce human errors by automatically generating diagnostic reports from medical images. A key challenge in RRG is achieving…

Computer Vision and Pattern Recognition · Computer Science 2026-05-01 Yucheng Chen , Yang Yu , Yufei Shi , Conghao Xiong , Xulei Yang , Si Yong Yeo

Radiology reports remain the primary mechanism by which imaging findings are communicated to clinical teams. However, much of the structured information behind these reports, including measurements, image evidence, prior comparisons, lesion…

Computation and Language · Computer Science 2026-05-26 Houman Kazemzadeh , Kamyar Naderi

Radiology report generation (RRG) models typically focus on individual exams, often overlooking the integration of historical visual or textual data, which is crucial for patient follow-ups. Traditional methods usually struggle with long…

Computer Vision and Pattern Recognition · Computer Science 2024-12-17 Tengfei Liu , Jiapu Wang , Yongli Hu , Mingjie Li , Junfei Yi , Xiaojun Chang , Junbin Gao , Baocai Yin

Significant developments in techniques such as encoder-decoder models have enabled us to represent information comprising multiple modalities. This information can further enhance many downstream tasks in the field of information retrieval…

Computation and Language · Computer Science 2023-02-14 Yash Verma , Anubhav Jangra , Raghvendra Kumar , Sriparna Saha

Medical Report Generation (MRG) is a key part of modern medical diagnostics, as it automatically generates reports from radiological images to reduce radiologists' burden. However, reliable MRG models for lesion description face three main…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Yucheng Song , Yifan Ge , Junhao Li , Zhining Liao , Zhifang Liao

The automation of chest X-ray reporting has garnered significant interest due to the time-consuming nature of the task. However, the clinical accuracy of free-text reports has proven challenging to quantify using natural language processing…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Matthias Keicher , Kamilia Zaripova , Tobias Czempiel , Kristina Mach , Ashkan Khakzar , Nassir Navab

LLMs have transformed the execution of numerous tasks, including those in the medical domain. Among these, summarizing patient-reported outcomes (PROs) into concise natural language reports is of particular interest to clinicians, as it…

Artificial Intelligence · Computer Science 2024-12-24 Matteo Marengo , Jarod Lévy , Jean-Emmanuel Bibault

Financial reports and earnings communications contain large volumes of structured and semi structured information, making detailed manual analysis inefficient. Earnings conference calls provide valuable evidence about a firm's performance,…

Computation and Language · Computer Science 2026-01-16 Tohida Rehman

Multicriteria optimization problems occur in many real life applications, for example in cancer radiotherapy treatment and in particular in intensity modulated radiation therapy (IMRT). In this work we focus on optimization problems with…

Optimization and Control · Mathematics 2017-04-05 Esther Bonacker , Aviv Gibali , Karl-Heinz Küfer , and Philipp Süss

MR imaging is a valuable diagnostic tool allowing to non-invasively visualize patient anatomy and pathology with high soft-tissue contrast. However, MRI acquisition is typically time-consuming, leading to patient discomfort and increased…

Image and Video Processing · Electrical Eng. & Systems 2025-12-23 Jan Nikolas Morshuis , Matthias Hein , Christian F. Baumgartner

Distributed representations of medical concepts have been used to support downstream clinical tasks recently. Electronic Health Records (EHR) capture different aspects of patients' hospital encounters and serve as a rich source for…

Computation and Language · Computer Science 2020-01-07 Shaika Chowdhury , Chenwei Zhang , Philip S. Yu , Yuan Luo

Medical imaging analysis plays a critical role in the diagnosis and treatment of various medical conditions. This paper focuses on chest X-ray images and their corresponding radiological reports. It presents a new model that learns a joint…

Computer Vision and Pattern Recognition · Computer Science 2023-03-22 Gefen Dawidowicz , Elad Hirsch , Ayellet Tal

In this paper, an innovative multi-modal deep learning model is proposed to deeply integrate heterogeneous information from medical images and clinical reports. First, for medical images, convolutional neural networks were used to extract…

Machine Learning · Computer Science 2024-05-29 Ziyan Yao , Fei Lin , Sheng Chai , Weijie He , Lu Dai , Xinghui Fei

Scalable and accurate identification of specific clinical outcomes has been enabled by machine-learning applied to electronic medical record (EMR) systems. The development of classification models requires the collection of a complete…

Methodology · Statistics 2020-11-09 W. Katherine Tan , Patrick J. Heagerty

During the patient's hospitalization, the physician must record daily observations of the patient and summarize them into a brief document called "discharge summary" when the patient is discharged. Automated generation of discharge summary…

Computation and Language · Computer Science 2023-03-13 Kenichiro Ando , Mamoru Komachi , Takashi Okumura , Hiromasa Horiguchi , Yuji Matsumoto
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