Related papers: Minimizing the Minimizers via Alphabet Reordering
The notion of \emph{string attractor} has recently been introduced in [Prezza, 2017] and studied in [Kempa and Prezza, 2018] to provide a unifying framework for known dictionary-based compressors. A string attractor for a word…
This paper studies the computational complexity of a robust variant of a two-stage submodular minimization problem that we call Robust Submodular Minimizer. In this problem, we are given $k$ submodular functions~$f_1,\dots,f_k$ over a set…
Wang et al. (IEEE Transactions on Information Theory, vol. 62, no. 8, 2016) proposed an explicit construction of an $(n=k+2,k)$ Minimum Storage Regenerating (MSR) code with $2$ parity nodes and subpacketization $2^{k/3}$. The number of…
The problem of approximate string matching is important in many different areas such as computational biology, text processing and pattern recognition. A great effort has been made to design efficient algorithms addressing several variants…
In this work, we propose a novel optimization model termed "sum-of-minimum" optimization. This model seeks to minimize the sum or average of $N$ objective functions over $k$ parameters, where each objective takes the minimum value of a…
The stable roommates problem can admit multiple different stable matchings. We have different criteria for deciding which one is optimal, but computing those is often NP-hard. We show that the problem of finding generous or rank-maximal…
Two permutations $s$ and $t$ are $k$-similar if they can be decomposed into subpermutations $s^1, \ldots, s^k$ and $t^1, \ldots, t^k$ such that $s^i$ is order-isomorphic to $t^i$ for all $i$. Recently, Dudek, Grytczuk and Ruci\'nski posed…
Subspace segmentation or subspace learning is a challenging and complicated task in machine learning. This paper builds a primary frame and solid theoretical bases for the minimal subspace segmentation (MSS) of finite samples. Existence and…
We study quantum algorithms for several fundamental string problems, including Longest Common Substring, Lexicographically Minimal String Rotation, and Longest Square Substring. These problems have been widely studied in the stringology…
Finding a sparse representation of a possibly noisy signal can be modeled as a variational minimization with l_q-sparsity constraints for q less than one. Especially for real-time, on-line, or iterative applications, in which problems of…
A palindrome is a string that reads the same forward and backward. A palindromic substring $w$ of a string $T$ is called a minimal unique palindromic substring (MUPS) of $T$ if $w$ occurs only once in $T$ and any proper palindromic…
This chapter is concerned with the design and analysis of algorithms for minimizing finite automata. Getting a minimal automaton is a fundamental issue in the use and implementation of finite automata tools in frameworks like text…
This paper investigates the number of quantum queries made to solve the problem of reconstructing an unknown string from its substrings in a certain query model. More concretely, the goal of the problem is to identify an unknown string $S$…
Given string $S[1..N]$ and integer $k$, the {\em suffix selection} problem is to determine the $k$th lexicographically smallest amongst the suffixes $S[i... N]$, $1 \leq i \leq N$. We study the suffix selection problem in the cache-aware…
Bitstrings can be permuted via permutations and compared via the lexicographic order. In this paper we study the complexity of finding a minimum of a bitstring via given permutations. As a global optima is known to be NP-complete, we study…
Submodular optimization has numerous applications such as crowdsourcing and viral marketing. In this paper, we study the fundamental problem of non-negative submodular function maximization subject to a $k$-system constraint, which…
In submodular $k$-secretary problem, the goal is to select $k$ items in a randomly ordered input so as to maximize the expected value of a given monotone submodular function on the set of selected items. In this paper, we introduce a…
Given \(k\) strings each of length at most $n$, computing the shortest common supersequence of them is a well-known NP-hard problem (when \(k\) is unbounded). On the other hand, when \(k=2\), such a shortest common supersequence can be…
Indexing of very large collections of strings such as those produced by the widespread sequencing technologies, heavily relies on multi-string generalizations of the Burrows-Wheeler Transform (BWT), and for this problem various in-memory…
Given a regular language L over an ordered alphabet $\Sigma$, the set of lexicographically smallest (resp., largest) words of each length is itself regular. Moreover, there exists an unambiguous finite-state transducer that, on a given word…