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We obtain novel index coding schemes and show that they provably outperform all previously known graph theoretic bounds proposed so far. Further, we establish a rather strong negative result: all known graph theoretic bounds are within a…

Information Theory · Computer Science 2014-02-18 Karthikeyan Shanmugam , Alexandros G. Dimakis , Michael Langberg

In this paper, we study the flip graph on the perfect matchings of a complete graph of even order. We investigate its combinatorial and spectral properties including connections to the signed reversal graph and we improve a previous upper…

Combinatorics · Mathematics 2021-10-20 Sebastian M. Cioabă , Gordon Royle , Zhao Kuang Tan

The Additive Coloring Problem is a variation of the Coloring Problem where labels of $\{1,\ldots,k\}$ are assigned to the vertices of a graph $G$ so that the sum of labels over the neighborhood of each vertex is a proper coloring of $G$.…

Discrete Mathematics · Computer Science 2020-02-28 Daniel Severin

We study the edge-colouring problem, and give efficient algorithms where the number of colours is parameterised by the graph's arboricity, $\alpha$. In a dynamic graph, subject to insertions and deletions, we give a deterministic algorithm…

Data Structures and Algorithms · Computer Science 2025-01-15 Aleksander B. G. Christiansen , Eva Rotenberg , Juliette Vlieghe

This thesis studies the graph alignment problem, the noisy version of the graph isomorphism problem, which aims to find a matching between the nodes of two graphs which preserves most of the edges. Focusing on the planted version where the…

Data Structures and Algorithms · Computer Science 2024-04-22 Luca Ganassali

Graph learning algorithms have attained state-of-the-art performance on many graph analysis tasks such as node classification, link prediction, and clustering. It has, however, become hard to track the field's burgeoning progress. One…

Machine Learning · Computer Science 2022-04-05 Anton Tsitsulin , Benedek Rozemberczki , John Palowitch , Bryan Perozzi

Affordable, high-quality whole-genome assemblies have made it possible to construct rich pangenomes that capture haplotype diversity across many species. As these datasets grow, they motivate the development of specialized techniques…

Genomics · Quantitative Biology 2025-12-19 Gorkem Kadir Solun , Ugur Dogrusoz

Graphs have a superior ability to represent relational data, like chemical compounds, proteins, and social networks. Hence, graph-level learning, which takes a set of graphs as input, has been applied to many tasks including comparison,…

Machine Learning · Computer Science 2023-05-26 Zhenyu Yang , Ge Zhang , Jia Wu , Jian Yang , Quan Z. Sheng , Shan Xue , Chuan Zhou , Charu Aggarwal , Hao Peng , Wenbin Hu , Edwin Hancock , Pietro Liò

List colouring is an influential and classic topic in graph theory. We initiate the study of a natural strengthening of this problem, where instead of one list-colouring, we seek many in parallel. Our explorations have uncovered a…

Combinatorics · Mathematics 2023-08-03 Stijn Cambie , Wouter Cames van Batenburg , Ewan Davies , Ross J. Kang

In this paper we study threshold coloring of graphs, where the vertex colors represented by integers are used to describe any spanning subgraph of the given graph as follows. Pairs of vertices with near colors imply the edge between them is…

Discrete Mathematics · Computer Science 2013-05-20 Md. Jawaherul Alam , Steven Chaplick , Gašper Fijavž , Michael Kaufmann , Stephen G. Kobourov , Sergey Pupyrev

In some applications of matching, the structural or hierarchical properties of the two graphs being aligned must be maintained. The hierarchical properties are induced by the direction of the edges in the two directed graphs. These…

Data Structures and Algorithms · Computer Science 2009-09-29 Sean M. Falconer , Dmitri Maslov

In this work, we improve the accuracy of several known algorithms to address the classification of large datasets when few labels are available. Our framework lies in the realm of graph-based semi-supervised learning. With novel…

Machine Learning · Computer Science 2024-07-02 Farid Bozorgnia

A mixed graph contains (undirected) edges as well as (directed) arcs, thus generalizing undirected and directed graphs. A proper coloring $c$ of a mixed graph $G$ assigns a positive integer to each vertex such that $c(u)\neq c(v)$ for every…

Computational Complexity · Computer Science 2026-05-01 Antonio Lauerbach , Konstanty Junosza-Szaniawski , Marie Diana Sieper , Alexander Wolff

A $k$-ranking is a vertex $k$-coloring such that if two vertices have the same color any path connecting them contains a vertex of larger color. The rank number of a graph is smallest $k$ such that $G$ has a $k$-ranking. For certain graphs…

Combinatorics · Mathematics 2017-02-08 Rigoberto Florez , Darren A. Narayan

The distinguishing chromatic number of a graph $G$, denoted $\chi_D(G)$, is the minimum number of colours in a proper vertex colouring of $G$ that is preserved by the identity automorphism only. Collins and Trenk proved that $\chi_D(G)\le…

Combinatorics · Mathematics 2025-05-26 Christoph Brause , Rafał Kalinowski , Monika Pilśniak , Ingo Schiemeyer

The anti-Ramsey number, $ar(G, H)$ is the minimum integer $k$ such that in any edge colouring of $G$ with $k$ colours there is a rainbow subgraph isomorphic to $H$, i.e., a copy of $H$ with each of its edges assigned a different colour. The…

Discrete Mathematics · Computer Science 2019-10-28 L Sunil Chandran , Abhiruk Lahiri , Nitin Singh

The evolution of gene regulatory networks in variable environments poses Multi-objective Optimization Problem (MOP), where the expression levels of genes must be tuned to meet the demands of each environment. When formalized in the context…

Optimization and Control · Mathematics 2018-04-23 Philippe Nghe , Bela M. Mulder , Sander J. Tans

We improve upper bounds on the chromatic number proven independently in \cite{reedNote} and \cite{ingo}. Our main lemma gives a sufficient condition for two paths in graph to be completely joined. Using this, we prove that if a graph has an…

Combinatorics · Mathematics 2011-11-10 Landon Rabern

A 2-edge-colored graph or a signed graph is a simple graph with two types of edges. A homomorphism from a 2-edge-colored graph $G$ to a 2-edge-colored graph $H$ is a mapping $\varphi: V(G) \rightarrow V(H)$ that maps every edge in $G$ to an…

Combinatorics · Mathematics 2020-09-14 Christopher Duffy , Fabien Jacques , Mickael Montassier , Alexandre Pinlou

In the online graph coloring problem, vertices from a graph G, known in advance, arrive in an online fashion and an algorithm must immediately assign a color to each incoming vertex v so that the revealed graph is properly colored. The…

Computational Complexity · Computer Science 2017-06-27 Martin Böhm , Pavel Veselý